Protein–RNA interactions for Protein: P28704

Rxrb, Retinoic acid receptor RXR-beta, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RxrbP28704 Gm6539-201ENSMUST00000119157 1064 ntBASIC13.69□□□□□ -0.22
RxrbP28704 Uqcc2-203ENSMUST00000119227 452 ntTSL 3 BASIC13.69□□□□□ -0.22
RxrbP28704 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RxrbP28704 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
RxrbP28704 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC13.69□□□□□ -0.22
RxrbP28704 AC166341.4-201ENSMUST00000220625 123 ntBASIC13.69□□□□□ -0.22
RxrbP28704 AC158529.1-201ENSMUST00000223618 239 ntBASIC13.69□□□□□ -0.22
RxrbP28704 Dars-202ENSMUST00000064309 645 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RxrbP28704 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
RxrbP28704 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RxrbP28704 Gm10175-201ENSMUST00000086013 645 ntBASIC13.69□□□□□ -0.22
RxrbP28704 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RxrbP28704 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RxrbP28704 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RxrbP28704 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RxrbP28704 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
RxrbP28704 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
RxrbP28704 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC13.69□□□□□ -0.22
RxrbP28704 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
RxrbP28704 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
RxrbP28704 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
RxrbP28704 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC13.69□□□□□ -0.22
RxrbP28704 Aacs-201ENSMUST00000031445 3239 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
RxrbP28704 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC13.69□□□□□ -0.22
RxrbP28704 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
RxrbP28704 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
RxrbP28704 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RxrbP28704 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RxrbP28704 Fam126b-201ENSMUST00000038372 2385 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RxrbP28704 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC13.68□□□□□ -0.22
RxrbP28704 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RxrbP28704 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RxrbP28704 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC13.68□□□□□ -0.22
RxrbP28704 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
RxrbP28704 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC13.68□□□□□ -0.22
RxrbP28704 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RxrbP28704 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RxrbP28704 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RxrbP28704 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RxrbP28704 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC13.68□□□□□ -0.22
RxrbP28704 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC13.68□□□□□ -0.22
RxrbP28704 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC13.68□□□□□ -0.22
RxrbP28704 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RxrbP28704 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RxrbP28704 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RxrbP28704 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RxrbP28704 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
RxrbP28704 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
RxrbP28704 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC13.68□□□□□ -0.22
RxrbP28704 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC13.68□□□□□ -0.22
RxrbP28704 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
RxrbP28704 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RxrbP28704 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.68□□□□□ -0.22
RxrbP28704 Ascc3-201ENSMUST00000035606 7760 ntAPPRIS P1 TSL 5 BASIC13.68□□□□□ -0.22
RxrbP28704 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
RxrbP28704 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
RxrbP28704 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
RxrbP28704 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RxrbP28704 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RxrbP28704 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
RxrbP28704 AC122314.1-201ENSMUST00000223056 2239 ntBASIC13.67□□□□□ -0.22
RxrbP28704 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RxrbP28704 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
RxrbP28704 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RxrbP28704 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
RxrbP28704 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC13.67□□□□□ -0.22
RxrbP28704 Zfp125-201ENSMUST00000079237 2488 ntBASIC13.67□□□□□ -0.22
RxrbP28704 Gm5989-201ENSMUST00000096092 2077 ntBASIC13.67□□□□□ -0.22
RxrbP28704 Gm26677-201ENSMUST00000180553 1672 ntTSL 5 BASIC13.67□□□□□ -0.22
RxrbP28704 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC13.67□□□□□ -0.22
RxrbP28704 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RxrbP28704 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RxrbP28704 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RxrbP28704 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RxrbP28704 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC13.67□□□□□ -0.22
RxrbP28704 AA619741-201ENSMUST00000195095 646 ntBASIC13.67□□□□□ -0.22
RxrbP28704 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC13.67□□□□□ -0.22
RxrbP28704 Gm6443-201ENSMUST00000203599 874 ntBASIC13.67□□□□□ -0.22
RxrbP28704 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RxrbP28704 Rbpms-202ENSMUST00000033995 1039 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RxrbP28704 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
RxrbP28704 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RxrbP28704 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RxrbP28704 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC13.67□□□□□ -0.22
RxrbP28704 Arid5a-203ENSMUST00000115031 3002 ntTSL 2 BASIC13.67□□□□□ -0.22
RxrbP28704 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RxrbP28704 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RxrbP28704 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
RxrbP28704 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
RxrbP28704 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
RxrbP28704 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC13.67□□□□□ -0.22
RxrbP28704 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
RxrbP28704 Osbpl7-201ENSMUST00000090020 3771 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
RxrbP28704 Sfmbt1-206ENSMUST00000228006 3299 ntAPPRIS P1 BASIC13.66□□□□□ -0.22
RxrbP28704 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.66□□□□□ -0.22
RxrbP28704 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RxrbP28704 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
RxrbP28704 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
RxrbP28704 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
RxrbP28704 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms