Protein–RNA interactions for Protein: P09405

Ncl, Nucleolin, mousemouse

Known RBP Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NclP09405 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
NclP09405 Gm37912-201ENSMUST00000191895 3076 ntBASIC20.21■□□□□ 0.83
NclP09405 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
NclP09405 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NclP09405 Rgs3-201ENSMUST00000065870 4698 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NclP09405 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
NclP09405 Emd-202ENSMUST00000088313 1338 ntTSL 2 BASIC20.21■□□□□ 0.83
NclP09405 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NclP09405 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC20.21■□□□□ 0.83
NclP09405 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
NclP09405 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NclP09405 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC20.2■□□□□ 0.82
NclP09405 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NclP09405 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
NclP09405 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
NclP09405 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
NclP09405 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NclP09405 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
NclP09405 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NclP09405 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NclP09405 Zscan30-202ENSMUST00000224144 1458 ntBASIC20.2■□□□□ 0.82
NclP09405 Ankra2-208ENSMUST00000226100 1476 ntBASIC20.2■□□□□ 0.82
NclP09405 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NclP09405 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NclP09405 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
NclP09405 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NclP09405 2610306M01Rik-201ENSMUST00000185414 1042 ntBASIC20.2■□□□□ 0.82
NclP09405 Gm38144-201ENSMUST00000192790 465 ntBASIC20.2■□□□□ 0.82
NclP09405 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NclP09405 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
NclP09405 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
NclP09405 Rps21-201ENSMUST00000059080 394 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NclP09405 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NclP09405 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
NclP09405 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
NclP09405 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
NclP09405 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
NclP09405 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC20.2■□□□□ 0.82
NclP09405 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
NclP09405 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
NclP09405 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
NclP09405 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
NclP09405 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC20.2■□□□□ 0.82
NclP09405 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NclP09405 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
NclP09405 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
NclP09405 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC20.19■□□□□ 0.82
NclP09405 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NclP09405 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NclP09405 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
NclP09405 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC20.19■□□□□ 0.82
NclP09405 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC20.19■□□□□ 0.82
NclP09405 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
NclP09405 Gm29649-201ENSMUST00000185649 419 ntBASIC20.19■□□□□ 0.82
NclP09405 Gm3654-202ENSMUST00000210597 472 ntTSL 3 BASIC20.19■□□□□ 0.82
NclP09405 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
NclP09405 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NclP09405 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC20.19■□□□□ 0.82
NclP09405 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC20.19■□□□□ 0.82
NclP09405 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NclP09405 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
NclP09405 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
NclP09405 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NclP09405 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NclP09405 Ksr1-207ENSMUST00000226282 5260 ntBASIC20.19■□□□□ 0.82
NclP09405 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NclP09405 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NclP09405 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NclP09405 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC20.19■□□□□ 0.82
NclP09405 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NclP09405 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NclP09405 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NclP09405 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NclP09405 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
NclP09405 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
NclP09405 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
NclP09405 Asap1-216ENSMUST00000177083 4415 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
NclP09405 Gm38391-201ENSMUST00000191720 4069 ntBASIC20.18■□□□□ 0.82
NclP09405 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
NclP09405 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NclP09405 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NclP09405 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC20.18■□□□□ 0.82
NclP09405 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NclP09405 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NclP09405 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC20.18■□□□□ 0.82
NclP09405 Gm17870-201ENSMUST00000219489 1174 ntBASIC20.18■□□□□ 0.82
NclP09405 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NclP09405 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NclP09405 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
NclP09405 Retreg3-201ENSMUST00000017946 3165 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NclP09405 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NclP09405 Ttc3-201ENSMUST00000117648 7417 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
NclP09405 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NclP09405 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
NclP09405 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
NclP09405 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
NclP09405 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC20.18■□□□□ 0.82
NclP09405 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
NclP09405 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC20.18■□□□□ 0.82
NclP09405 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms