Protein–RNA interactions for Protein: O88874

Ccnk, Cyclin-K, mousemouse

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnkO88874 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CcnkO88874 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CcnkO88874 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
CcnkO88874 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CcnkO88874 Gm9924-202ENSMUST00000192760 2311 ntBASIC12.17□□□□□ -0.46
CcnkO88874 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CcnkO88874 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
CcnkO88874 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CcnkO88874 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
CcnkO88874 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC12.17□□□□□ -0.46
CcnkO88874 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CcnkO88874 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CcnkO88874 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC12.17□□□□□ -0.46
CcnkO88874 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CcnkO88874 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
CcnkO88874 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
CcnkO88874 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
CcnkO88874 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
CcnkO88874 Gm12689-201ENSMUST00000094955 1359 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
CcnkO88874 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.17□□□□□ -0.46
CcnkO88874 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
CcnkO88874 Lrr1-201ENSMUST00000110621 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CcnkO88874 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CcnkO88874 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC12.16□□□□□ -0.46
CcnkO88874 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CcnkO88874 0610010F05Rik-208ENSMUST00000180260 4128 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
CcnkO88874 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CcnkO88874 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CcnkO88874 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CcnkO88874 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CcnkO88874 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CcnkO88874 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
CcnkO88874 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CcnkO88874 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CcnkO88874 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC12.16□□□□□ -0.46
CcnkO88874 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC12.16□□□□□ -0.46
CcnkO88874 Gm27494-201ENSMUST00000184735 189 ntBASIC12.16□□□□□ -0.46
CcnkO88874 Gga3-201ENSMUST00000019135 3816 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
CcnkO88874 Gm38225-201ENSMUST00000194001 393 ntBASIC12.16□□□□□ -0.46
CcnkO88874 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC12.16□□□□□ -0.46
CcnkO88874 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CcnkO88874 Gtpbp10-201ENSMUST00000088842 941 ntTSL 5 BASIC12.16□□□□□ -0.46
CcnkO88874 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CcnkO88874 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CcnkO88874 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CcnkO88874 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC12.16□□□□□ -0.46
CcnkO88874 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
CcnkO88874 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
CcnkO88874 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
CcnkO88874 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
CcnkO88874 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC12.15□□□□□ -0.46
CcnkO88874 Wars-201ENSMUST00000109848 2831 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CcnkO88874 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
CcnkO88874 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CcnkO88874 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
CcnkO88874 Ncaph-201ENSMUST00000110387 2695 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CcnkO88874 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CcnkO88874 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CcnkO88874 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC12.15□□□□□ -0.46
CcnkO88874 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CcnkO88874 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
CcnkO88874 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CcnkO88874 Sdc4-201ENSMUST00000017153 2458 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CcnkO88874 AC238940.1-201ENSMUST00000225106 1858 ntBASIC12.15□□□□□ -0.46
CcnkO88874 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CcnkO88874 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CcnkO88874 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CcnkO88874 Nudt18-203ENSMUST00000228768 1578 ntBASIC12.15□□□□□ -0.46
CcnkO88874 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CcnkO88874 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC12.15□□□□□ -0.46
CcnkO88874 Pcp2-203ENSMUST00000133459 470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
CcnkO88874 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC12.15□□□□□ -0.46
CcnkO88874 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CcnkO88874 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
CcnkO88874 AC166341.4-201ENSMUST00000220625 123 ntBASIC12.15□□□□□ -0.46
CcnkO88874 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
CcnkO88874 Pcp2-201ENSMUST00000004749 495 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
CcnkO88874 G430095P16Rik-201ENSMUST00000098571 721 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CcnkO88874 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
CcnkO88874 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
CcnkO88874 Pik3cd-201ENSMUST00000038859 4905 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CcnkO88874 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CcnkO88874 Tubgcp3-201ENSMUST00000000776 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CcnkO88874 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC12.15□□□□□ -0.46
CcnkO88874 Zfp536-203ENSMUST00000176114 4341 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CcnkO88874 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC12.15□□□□□ -0.46
CcnkO88874 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CcnkO88874 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
CcnkO88874 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
CcnkO88874 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC12.15□□□□□ -0.46
CcnkO88874 AC164426.2-201ENSMUST00000225993 2492 ntBASIC12.15□□□□□ -0.46
CcnkO88874 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
CcnkO88874 Gm6756-201ENSMUST00000180647 1620 ntBASIC12.15□□□□□ -0.47
CcnkO88874 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.47
CcnkO88874 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
CcnkO88874 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
CcnkO88874 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
CcnkO88874 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CcnkO88874 Coasy-202ENSMUST00000107308 2386 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
CcnkO88874 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 41.7 ms