Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Alx4O35137 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Alx4O35137 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Alx4O35137 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Alx4O35137 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.18□□□□□ -0.46
Alx4O35137 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC12.18□□□□□ -0.46
Alx4O35137 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Alx4O35137 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Alx4O35137 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.18□□□□□ -0.46
Alx4O35137 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Alx4O35137 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Alx4O35137 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC12.17□□□□□ -0.46
Alx4O35137 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Alx4O35137 Prkcd-203ENSMUST00000112203 1927 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Alx4O35137 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Alx4O35137 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Alx4O35137 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Alx4O35137 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Alx4O35137 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Alx4O35137 Tmed9-203ENSMUST00000224741 1450 ntBASIC12.17□□□□□ -0.46
Alx4O35137 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC12.17□□□□□ -0.46
Alx4O35137 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Alx4O35137 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Alx4O35137 Gm25287-201ENSMUST00000103846 110 ntBASIC12.17□□□□□ -0.46
Alx4O35137 Gm22918-201ENSMUST00000103855 110 ntBASIC12.17□□□□□ -0.46
Alx4O35137 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Alx4O35137 Gm15678-201ENSMUST00000117573 960 ntBASIC12.17□□□□□ -0.46
Alx4O35137 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC12.17□□□□□ -0.46
Alx4O35137 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Alx4O35137 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Alx4O35137 Gm9824-201ENSMUST00000178707 561 ntBASIC12.17□□□□□ -0.46
Alx4O35137 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Alx4O35137 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC12.17□□□□□ -0.46
Alx4O35137 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC12.17□□□□□ -0.46
Alx4O35137 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Alx4O35137 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Alx4O35137 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC12.17□□□□□ -0.46
Alx4O35137 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Alx4O35137 Ptprr-204ENSMUST00000128399 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.17□□□□□ -0.46
Alx4O35137 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Alx4O35137 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Alx4O35137 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Alx4O35137 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Alx4O35137 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Alx4O35137 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Alx4O35137 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC12.17□□□□□ -0.46
Alx4O35137 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC12.17□□□□□ -0.46
Alx4O35137 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Alx4O35137 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Alx4O35137 Abcd1-201ENSMUST00000002084 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Alx4O35137 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Alx4O35137 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC12.17□□□□□ -0.46
Alx4O35137 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Alx4O35137 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Alx4O35137 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.16□□□□□ -0.46
Alx4O35137 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Alx4O35137 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Alx4O35137 Gm14452-201ENSMUST00000118680 1632 ntBASIC12.16□□□□□ -0.46
Alx4O35137 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Alx4O35137 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.16□□□□□ -0.46
Alx4O35137 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Alx4O35137 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Alx4O35137 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
Alx4O35137 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Alx4O35137 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC12.16□□□□□ -0.46
Alx4O35137 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Alx4O35137 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC12.16□□□□□ -0.46
Alx4O35137 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC12.16□□□□□ -0.46
Alx4O35137 Gm28577-201ENSMUST00000176106 741 ntTSL 5 BASIC12.16□□□□□ -0.46
Alx4O35137 Gm18766-201ENSMUST00000189811 808 ntBASIC12.16□□□□□ -0.46
Alx4O35137 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC12.16□□□□□ -0.46
Alx4O35137 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC12.16□□□□□ -0.46
Alx4O35137 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Alx4O35137 Gm16476-201ENSMUST00000221544 139 ntBASIC12.16□□□□□ -0.46
Alx4O35137 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Alx4O35137 Tmem132e-202ENSMUST00000092852 4105 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
Alx4O35137 Gpsm2-201ENSMUST00000029482 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Alx4O35137 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Alx4O35137 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
Alx4O35137 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Alx4O35137 Cadm2-202ENSMUST00000120594 3248 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
Alx4O35137 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Alx4O35137 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
Alx4O35137 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC12.16□□□□□ -0.46
Alx4O35137 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Alx4O35137 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
Alx4O35137 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Alx4O35137 Gm10176-201ENSMUST00000159707 2264 ntBASIC12.16□□□□□ -0.46
Alx4O35137 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
Alx4O35137 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC12.16□□□□□ -0.46
Alx4O35137 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
Alx4O35137 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
Alx4O35137 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.15□□□□□ -0.46
Alx4O35137 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Alx4O35137 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Alx4O35137 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.46
Alx4O35137 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
Alx4O35137 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
Alx4O35137 AC168058.1-201ENSMUST00000219521 2282 ntBASIC12.15□□□□□ -0.46
Alx4O35137 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms