Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Pcdh17E9PXF0 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh17E9PXF0 Gm6244-201ENSMUST00000178732 841 ntBASIC12.72□□□□□ -0.37
Pcdh17E9PXF0 Gm27772-201ENSMUST00000184900 187 ntBASIC12.72□□□□□ -0.37
Pcdh17E9PXF0 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC12.72□□□□□ -0.37
Pcdh17E9PXF0 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC12.72□□□□□ -0.37
Pcdh17E9PXF0 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh17E9PXF0 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh17E9PXF0 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh17E9PXF0 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh17E9PXF0 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh17E9PXF0 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh17E9PXF0 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
Pcdh17E9PXF0 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh17E9PXF0 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh17E9PXF0 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Pcdh17E9PXF0 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Pcdh17E9PXF0 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
Pcdh17E9PXF0 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdh17E9PXF0 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
Pcdh17E9PXF0 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdh17E9PXF0 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdh17E9PXF0 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdh17E9PXF0 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdh17E9PXF0 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdh17E9PXF0 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdh17E9PXF0 Cep295nl-202ENSMUST00000168100 1602 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Pcdh17E9PXF0 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.71□□□□□ -0.37
Pcdh17E9PXF0 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdh17E9PXF0 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
Pcdh17E9PXF0 Gm4984-201ENSMUST00000115987 360 ntBASIC12.71□□□□□ -0.37
Pcdh17E9PXF0 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC12.71□□□□□ -0.37
Pcdh17E9PXF0 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC12.71□□□□□ -0.37
Pcdh17E9PXF0 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdh17E9PXF0 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdh17E9PXF0 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdh17E9PXF0 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC12.71□□□□□ -0.37
Pcdh17E9PXF0 AC131690.1-201ENSMUST00000218406 374 ntBASIC12.71□□□□□ -0.37
Pcdh17E9PXF0 Gm17794-201ENSMUST00000220252 955 ntBASIC12.71□□□□□ -0.37
Pcdh17E9PXF0 AC125117.1-201ENSMUST00000228121 468 ntBASIC12.71□□□□□ -0.37
Pcdh17E9PXF0 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdh17E9PXF0 Crybb2-201ENSMUST00000031295 724 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdh17E9PXF0 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdh17E9PXF0 AC121805.2-201ENSMUST00000218808 2538 ntBASIC12.71□□□□□ -0.37
Pcdh17E9PXF0 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdh17E9PXF0 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdh17E9PXF0 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Pcdh17E9PXF0 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC12.71□□□□□ -0.37
Pcdh17E9PXF0 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pcdh17E9PXF0 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pcdh17E9PXF0 Gm37015-201ENSMUST00000192763 1521 ntBASIC12.71□□□□□ -0.38
Pcdh17E9PXF0 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pcdh17E9PXF0 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pcdh17E9PXF0 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Pcdh17E9PXF0 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pcdh17E9PXF0 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Pcdh17E9PXF0 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pcdh17E9PXF0 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pcdh17E9PXF0 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pcdh17E9PXF0 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Pcdh17E9PXF0 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh17E9PXF0 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh17E9PXF0 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh17E9PXF0 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh17E9PXF0 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh17E9PXF0 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh17E9PXF0 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC12.7□□□□□ -0.38
Pcdh17E9PXF0 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh17E9PXF0 Islr-202ENSMUST00000168864 2076 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh17E9PXF0 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh17E9PXF0 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh17E9PXF0 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh17E9PXF0 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh17E9PXF0 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh17E9PXF0 Gm5303-201ENSMUST00000117943 1252 ntBASIC12.7□□□□□ -0.38
Pcdh17E9PXF0 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC12.7□□□□□ -0.38
Pcdh17E9PXF0 Gm15429-201ENSMUST00000151268 798 ntBASIC12.7□□□□□ -0.38
Pcdh17E9PXF0 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC12.7□□□□□ -0.38
Pcdh17E9PXF0 Gm8463-201ENSMUST00000208573 613 ntBASIC12.7□□□□□ -0.38
Pcdh17E9PXF0 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh17E9PXF0 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh17E9PXF0 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh17E9PXF0 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Pcdh17E9PXF0 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh17E9PXF0 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh17E9PXF0 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh17E9PXF0 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh17E9PXF0 Ankra2-208ENSMUST00000226100 1476 ntBASIC12.7□□□□□ -0.38
Pcdh17E9PXF0 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh17E9PXF0 Gm44981-201ENSMUST00000205549 1943 ntBASIC12.7□□□□□ -0.38
Pcdh17E9PXF0 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh17E9PXF0 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC12.7□□□□□ -0.38
Pcdh17E9PXF0 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh17E9PXF0 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh17E9PXF0 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh17E9PXF0 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Pcdh17E9PXF0 Gm43056-201ENSMUST00000197865 2791 ntBASIC12.69□□□□□ -0.38
Pcdh17E9PXF0 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Pcdh17E9PXF0 Gm43570-201ENSMUST00000199951 3688 ntBASIC12.69□□□□□ -0.38
Pcdh17E9PXF0 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms