Protein–RNA interactions for Protein: E0CXC2

Gm28043, E3 ubiquitin-protein ligase RNF8, mousemouse

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm28043E0CXC2 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC13.71□□□□□ -0.21
Gm28043E0CXC2 Dusp13-201ENSMUST00000075040 1745 ntAPPRIS P2 TSL 1 (best) BASIC13.71□□□□□ -0.21
Gm28043E0CXC2 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC13.71□□□□□ -0.21
Gm28043E0CXC2 Gm5566-201ENSMUST00000116118 459 ntBASIC13.71□□□□□ -0.21
Gm28043E0CXC2 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC13.71□□□□□ -0.21
Gm28043E0CXC2 Gm12882-201ENSMUST00000121696 517 ntBASIC13.71□□□□□ -0.21
Gm28043E0CXC2 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
Gm28043E0CXC2 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Gm28043E0CXC2 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Gm28043E0CXC2 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Gm28043E0CXC2 Elof1-203ENSMUST00000213233 810 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
Gm28043E0CXC2 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Gm28043E0CXC2 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC13.71□□□□□ -0.21
Gm28043E0CXC2 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Gm28043E0CXC2 Gm5867-201ENSMUST00000063197 592 ntBASIC13.71□□□□□ -0.21
Gm28043E0CXC2 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC13.71□□□□□ -0.21
Gm28043E0CXC2 Limch1-204ENSMUST00000118242 5050 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.21
Gm28043E0CXC2 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Gm28043E0CXC2 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
Gm28043E0CXC2 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
Gm28043E0CXC2 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Gm28043E0CXC2 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
Gm28043E0CXC2 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC13.71□□□□□ -0.21
Gm28043E0CXC2 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
Gm28043E0CXC2 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Gm28043E0CXC2 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
Gm28043E0CXC2 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
Gm28043E0CXC2 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
Gm28043E0CXC2 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Gm28043E0CXC2 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC13.71□□□□□ -0.22
Gm28043E0CXC2 Fam155a-201ENSMUST00000110969 3388 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.22
Gm28043E0CXC2 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.22
Gm28043E0CXC2 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC13.71□□□□□ -0.22
Gm28043E0CXC2 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Gm28043E0CXC2 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Gm28043E0CXC2 Pcdhac1-201ENSMUST00000007584 5419 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Gm28043E0CXC2 Slitrk5-201ENSMUST00000042767 4831 ntAPPRIS P1 TSL 2 BASIC13.7□□□□□ -0.22
Gm28043E0CXC2 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Gm28043E0CXC2 Gm10305-201ENSMUST00000195331 2475 ntBASIC13.7□□□□□ -0.22
Gm28043E0CXC2 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Gm28043E0CXC2 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Gm28043E0CXC2 Intu-202ENSMUST00000091186 6387 ntAPPRIS P2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Gm28043E0CXC2 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Gm28043E0CXC2 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Gm28043E0CXC2 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Gm28043E0CXC2 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Gm28043E0CXC2 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Gm28043E0CXC2 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Gm28043E0CXC2 Gm7336-201ENSMUST00000107041 1232 ntBASIC13.7□□□□□ -0.22
Gm28043E0CXC2 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Gm28043E0CXC2 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Gm28043E0CXC2 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC13.7□□□□□ -0.22
Gm28043E0CXC2 Platr13-201ENSMUST00000133945 375 ntTSL 5 BASIC13.7□□□□□ -0.22
Gm28043E0CXC2 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC13.7□□□□□ -0.22
Gm28043E0CXC2 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC13.7□□□□□ -0.22
Gm28043E0CXC2 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC13.7□□□□□ -0.22
Gm28043E0CXC2 Gm5779-201ENSMUST00000218467 910 ntBASIC13.7□□□□□ -0.22
Gm28043E0CXC2 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Gm28043E0CXC2 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Gm28043E0CXC2 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Gm28043E0CXC2 Col6a3-208ENSMUST00000188587 8285 ntTSL 5 BASIC13.7□□□□□ -0.22
Gm28043E0CXC2 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Gm28043E0CXC2 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Gm28043E0CXC2 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Gm28043E0CXC2 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Gm28043E0CXC2 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC13.7□□□□□ -0.22
Gm28043E0CXC2 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Gm28043E0CXC2 Gm20632-201ENSMUST00000176760 2427 ntBASIC13.7□□□□□ -0.22
Gm28043E0CXC2 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
Gm28043E0CXC2 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Gm28043E0CXC2 Map6-201ENSMUST00000068973 3430 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
Gm28043E0CXC2 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
Gm28043E0CXC2 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gm28043E0CXC2 Madd-212ENSMUST00000111375 5706 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Gm28043E0CXC2 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Gm28043E0CXC2 Csk-209ENSMUST00000217314 2162 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gm28043E0CXC2 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gm28043E0CXC2 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC13.69□□□□□ -0.22
Gm28043E0CXC2 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gm28043E0CXC2 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC13.69□□□□□ -0.22
Gm28043E0CXC2 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gm28043E0CXC2 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gm28043E0CXC2 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gm28043E0CXC2 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gm28043E0CXC2 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gm28043E0CXC2 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gm28043E0CXC2 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gm28043E0CXC2 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC13.69□□□□□ -0.22
Gm28043E0CXC2 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gm28043E0CXC2 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC13.69□□□□□ -0.22
Gm28043E0CXC2 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC13.69□□□□□ -0.22
Gm28043E0CXC2 Gm9719-201ENSMUST00000162765 543 ntBASIC13.69□□□□□ -0.22
Gm28043E0CXC2 Gm37171-201ENSMUST00000192636 1185 ntBASIC13.69□□□□□ -0.22
Gm28043E0CXC2 AA619741-201ENSMUST00000195095 646 ntBASIC13.69□□□□□ -0.22
Gm28043E0CXC2 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC13.69□□□□□ -0.22
Gm28043E0CXC2 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC13.69□□□□□ -0.22
Gm28043E0CXC2 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gm28043E0CXC2 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gm28043E0CXC2 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Gm28043E0CXC2 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 34 ms