Protein–RNA interactions for Protein: D3Z3K2

Ccnb1ip1, E3 ubiquitin-protein ligase CCNB1IP1, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccnb1ip1D3Z3K2 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ccnb1ip1D3Z3K2 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Ccnb1ip1D3Z3K2 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC12.29□□□□□ -0.44
Ccnb1ip1D3Z3K2 Ccdc81-201ENSMUST00000041195 2439 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccnb1ip1D3Z3K2 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccnb1ip1D3Z3K2 Tfe3-204ENSMUST00000115677 2943 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ccnb1ip1D3Z3K2 Pbx1-205ENSMUST00000176540 6876 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccnb1ip1D3Z3K2 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccnb1ip1D3Z3K2 Rpap1-203ENSMUST00000110793 5458 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Ccnb1ip1D3Z3K2 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccnb1ip1D3Z3K2 Mafg-202ENSMUST00000106180 732 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Ccnb1ip1D3Z3K2 Mafg-204ENSMUST00000106182 1104 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Ccnb1ip1D3Z3K2 Mthfsl-201ENSMUST00000113110 801 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccnb1ip1D3Z3K2 Mthfs-203ENSMUST00000118870 705 ntTSL 3 BASIC12.29□□□□□ -0.44
Ccnb1ip1D3Z3K2 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Ccnb1ip1D3Z3K2 Gm5682-201ENSMUST00000173402 505 ntBASIC12.29□□□□□ -0.44
Ccnb1ip1D3Z3K2 Gm3809-201ENSMUST00000180973 1006 ntBASIC12.29□□□□□ -0.44
Ccnb1ip1D3Z3K2 Hs3st2-202ENSMUST00000206880 1149 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ccnb1ip1D3Z3K2 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC12.29□□□□□ -0.44
Ccnb1ip1D3Z3K2 AC153889.1-201ENSMUST00000219257 330 ntBASIC12.29□□□□□ -0.44
Ccnb1ip1D3Z3K2 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccnb1ip1D3Z3K2 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccnb1ip1D3Z3K2 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccnb1ip1D3Z3K2 Mthfs-201ENSMUST00000085256 816 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccnb1ip1D3Z3K2 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC12.29□□□□□ -0.44
Ccnb1ip1D3Z3K2 Mafk-202ENSMUST00000110836 3097 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Ccnb1ip1D3Z3K2 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccnb1ip1D3Z3K2 Alpi-201ENSMUST00000113270 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccnb1ip1D3Z3K2 Ccnk-201ENSMUST00000101055 2627 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Ccnb1ip1D3Z3K2 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ccnb1ip1D3Z3K2 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccnb1ip1D3Z3K2 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccnb1ip1D3Z3K2 Sidt1-201ENSMUST00000047446 4279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccnb1ip1D3Z3K2 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccnb1ip1D3Z3K2 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ccnb1ip1D3Z3K2 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccnb1ip1D3Z3K2 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Ccnb1ip1D3Z3K2 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Ccnb1ip1D3Z3K2 Arntl-206ENSMUST00000211770 2464 ntTSL 5 BASIC12.29□□□□□ -0.44
Ccnb1ip1D3Z3K2 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC12.29□□□□□ -0.44
Ccnb1ip1D3Z3K2 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccnb1ip1D3Z3K2 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccnb1ip1D3Z3K2 Gm13233-201ENSMUST00000118760 1443 ntBASIC12.28□□□□□ -0.44
Ccnb1ip1D3Z3K2 Gm13244-201ENSMUST00000118855 1446 ntBASIC12.28□□□□□ -0.44
Ccnb1ip1D3Z3K2 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccnb1ip1D3Z3K2 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccnb1ip1D3Z3K2 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Ccnb1ip1D3Z3K2 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccnb1ip1D3Z3K2 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccnb1ip1D3Z3K2 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccnb1ip1D3Z3K2 Matn2-203ENSMUST00000226766 3252 ntBASIC12.28□□□□□ -0.44
Ccnb1ip1D3Z3K2 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccnb1ip1D3Z3K2 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccnb1ip1D3Z3K2 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccnb1ip1D3Z3K2 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccnb1ip1D3Z3K2 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccnb1ip1D3Z3K2 Gm14703-201ENSMUST00000145894 1820 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccnb1ip1D3Z3K2 Gm7609-201ENSMUST00000113402 1538 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccnb1ip1D3Z3K2 Gm43417-201ENSMUST00000201586 5207 ntBASIC12.28□□□□□ -0.44
Ccnb1ip1D3Z3K2 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccnb1ip1D3Z3K2 Nrn1-202ENSMUST00000122286 691 ntTSL 3 BASIC12.28□□□□□ -0.44
Ccnb1ip1D3Z3K2 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC12.28□□□□□ -0.44
Ccnb1ip1D3Z3K2 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Ccnb1ip1D3Z3K2 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Ccnb1ip1D3Z3K2 Gm4535-201ENSMUST00000182274 558 ntBASIC12.28□□□□□ -0.44
Ccnb1ip1D3Z3K2 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccnb1ip1D3Z3K2 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccnb1ip1D3Z3K2 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccnb1ip1D3Z3K2 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccnb1ip1D3Z3K2 Gm10355-201ENSMUST00000097146 517 ntBASIC12.28□□□□□ -0.44
Ccnb1ip1D3Z3K2 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccnb1ip1D3Z3K2 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccnb1ip1D3Z3K2 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccnb1ip1D3Z3K2 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccnb1ip1D3Z3K2 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccnb1ip1D3Z3K2 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Ccnb1ip1D3Z3K2 Gm5366-201ENSMUST00000215494 1338 ntBASIC12.28□□□□□ -0.44
Ccnb1ip1D3Z3K2 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccnb1ip1D3Z3K2 Syt2-204ENSMUST00000188842 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccnb1ip1D3Z3K2 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccnb1ip1D3Z3K2 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccnb1ip1D3Z3K2 Cyth1-201ENSMUST00000017276 3135 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccnb1ip1D3Z3K2 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccnb1ip1D3Z3K2 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
Ccnb1ip1D3Z3K2 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Ccnb1ip1D3Z3K2 Myo18a-210ENSMUST00000130305 5450 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Ccnb1ip1D3Z3K2 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.44
Ccnb1ip1D3Z3K2 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC12.27□□□□□ -0.44
Ccnb1ip1D3Z3K2 Sh3kbp1-206ENSMUST00000112456 7317 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ccnb1ip1D3Z3K2 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ccnb1ip1D3Z3K2 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
Ccnb1ip1D3Z3K2 Irf6-201ENSMUST00000076521 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ccnb1ip1D3Z3K2 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ccnb1ip1D3Z3K2 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ccnb1ip1D3Z3K2 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ccnb1ip1D3Z3K2 Ccng1-201ENSMUST00000020576 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ccnb1ip1D3Z3K2 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Ccnb1ip1D3Z3K2 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
Ccnb1ip1D3Z3K2 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC12.27□□□□□ -0.45
Ccnb1ip1D3Z3K2 Lrfn3-201ENSMUST00000046351 2886 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 50.8 ms