Protein–RNA interactions for Protein: Q9CPV1

Ska1, Spindle and kinetochore-associated protein 1, mousemouse

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ska1Q9CPV1 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ska1Q9CPV1 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ska1Q9CPV1 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ska1Q9CPV1 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ska1Q9CPV1 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ska1Q9CPV1 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ska1Q9CPV1 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ska1Q9CPV1 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ska1Q9CPV1 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ska1Q9CPV1 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ska1Q9CPV1 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ska1Q9CPV1 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
Ska1Q9CPV1 Tbata-201ENSMUST00000035894 1506 ntAPPRIS P3 TSL 5 BASIC12.93□□□□□ -0.34
Ska1Q9CPV1 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ska1Q9CPV1 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
Ska1Q9CPV1 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ska1Q9CPV1 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Ska1Q9CPV1 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC12.92□□□□□ -0.34
Ska1Q9CPV1 Emp1-206ENSMUST00000205156 2911 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Ska1Q9CPV1 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ska1Q9CPV1 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ska1Q9CPV1 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC12.92□□□□□ -0.34
Ska1Q9CPV1 Rpusd2-201ENSMUST00000028796 2706 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ska1Q9CPV1 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Ska1Q9CPV1 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ska1Q9CPV1 Gm6539-201ENSMUST00000119157 1064 ntBASIC12.92□□□□□ -0.34
Ska1Q9CPV1 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ska1Q9CPV1 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ska1Q9CPV1 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ska1Q9CPV1 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ska1Q9CPV1 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC12.92□□□□□ -0.34
Ska1Q9CPV1 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ska1Q9CPV1 AC124549.3-201ENSMUST00000225541 367 ntBASIC12.92□□□□□ -0.34
Ska1Q9CPV1 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ska1Q9CPV1 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ska1Q9CPV1 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ska1Q9CPV1 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ska1Q9CPV1 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ska1Q9CPV1 Gm28386-201ENSMUST00000189147 1849 ntBASIC12.92□□□□□ -0.34
Ska1Q9CPV1 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ska1Q9CPV1 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ska1Q9CPV1 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ska1Q9CPV1 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ska1Q9CPV1 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ska1Q9CPV1 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Ska1Q9CPV1 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ska1Q9CPV1 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Ska1Q9CPV1 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC12.92□□□□□ -0.34
Ska1Q9CPV1 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ska1Q9CPV1 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ska1Q9CPV1 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Ska1Q9CPV1 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Ska1Q9CPV1 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ska1Q9CPV1 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ska1Q9CPV1 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ska1Q9CPV1 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ska1Q9CPV1 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ska1Q9CPV1 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ska1Q9CPV1 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ska1Q9CPV1 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ska1Q9CPV1 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC12.91□□□□□ -0.34
Ska1Q9CPV1 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ska1Q9CPV1 Gm15957-201ENSMUST00000118893 974 ntBASIC12.91□□□□□ -0.34
Ska1Q9CPV1 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC12.91□□□□□ -0.34
Ska1Q9CPV1 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ska1Q9CPV1 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC12.91□□□□□ -0.34
Ska1Q9CPV1 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC12.91□□□□□ -0.34
Ska1Q9CPV1 Gm18889-201ENSMUST00000174284 929 ntBASIC12.91□□□□□ -0.34
Ska1Q9CPV1 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Ska1Q9CPV1 Gm18049-201ENSMUST00000208909 581 ntBASIC12.91□□□□□ -0.34
Ska1Q9CPV1 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC12.91□□□□□ -0.34
Ska1Q9CPV1 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
Ska1Q9CPV1 AC131710.1-201ENSMUST00000228336 990 ntBASIC12.91□□□□□ -0.34
Ska1Q9CPV1 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ska1Q9CPV1 Plet1-201ENSMUST00000114474 1689 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ska1Q9CPV1 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Ska1Q9CPV1 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC12.91□□□□□ -0.34
Ska1Q9CPV1 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ska1Q9CPV1 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ska1Q9CPV1 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Ska1Q9CPV1 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC12.91□□□□□ -0.34
Ska1Q9CPV1 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Ska1Q9CPV1 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ska1Q9CPV1 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ska1Q9CPV1 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Ska1Q9CPV1 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ska1Q9CPV1 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ska1Q9CPV1 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ska1Q9CPV1 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.91□□□□□ -0.34
Ska1Q9CPV1 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ska1Q9CPV1 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.34
Ska1Q9CPV1 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ska1Q9CPV1 Cavin1-201ENSMUST00000060792 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ska1Q9CPV1 Gm17018-201ENSMUST00000047057 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ska1Q9CPV1 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ska1Q9CPV1 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ska1Q9CPV1 Krt16-201ENSMUST00000007280 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ska1Q9CPV1 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ska1Q9CPV1 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ska1Q9CPV1 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 26.5 ms