Protein–RNA interactions for Protein: Q99K46

Usp11, Ubiquitin carboxyl-terminal hydrolase 11, mousemouse

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp11Q99K46 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp11Q99K46 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
Usp11Q99K46 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp11Q99K46 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Usp11Q99K46 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp11Q99K46 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC14.43□□□□□ -0.1
Usp11Q99K46 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp11Q99K46 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Usp11Q99K46 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp11Q99K46 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp11Q99K46 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Usp11Q99K46 Gm45003-201ENSMUST00000205875 2158 ntBASIC14.43□□□□□ -0.1
Usp11Q99K46 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
Usp11Q99K46 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC14.43□□□□□ -0.1
Usp11Q99K46 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Usp11Q99K46 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Usp11Q99K46 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp11Q99K46 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp11Q99K46 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp11Q99K46 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Usp11Q99K46 Gm12626-201ENSMUST00000117339 1983 ntBASIC14.42□□□□□ -0.1
Usp11Q99K46 Gm12623-201ENSMUST00000119849 1983 ntBASIC14.42□□□□□ -0.1
Usp11Q99K46 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp11Q99K46 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp11Q99K46 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp11Q99K46 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Usp11Q99K46 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp11Q99K46 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp11Q99K46 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC14.42□□□□□ -0.1
Usp11Q99K46 Gm15957-201ENSMUST00000118893 974 ntBASIC14.42□□□□□ -0.1
Usp11Q99K46 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Usp11Q99K46 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Usp11Q99K46 Mir7023-201ENSMUST00000185093 64 ntBASIC14.42□□□□□ -0.1
Usp11Q99K46 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Usp11Q99K46 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC14.42□□□□□ -0.1
Usp11Q99K46 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Usp11Q99K46 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp11Q99K46 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp11Q99K46 Pgpep1-201ENSMUST00000070173 4883 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp11Q99K46 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp11Q99K46 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp11Q99K46 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Usp11Q99K46 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Usp11Q99K46 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Usp11Q99K46 Armcx1-202ENSMUST00000051256 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp11Q99K46 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Usp11Q99K46 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Usp11Q99K46 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC14.41□□□□□ -0.1
Usp11Q99K46 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp11Q99K46 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp11Q99K46 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp11Q99K46 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp11Q99K46 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp11Q99K46 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Usp11Q99K46 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp11Q99K46 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp11Q99K46 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC14.41□□□□□ -0.1
Usp11Q99K46 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Usp11Q99K46 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp11Q99K46 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Usp11Q99K46 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp11Q99K46 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp11Q99K46 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp11Q99K46 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Usp11Q99K46 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Usp11Q99K46 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Usp11Q99K46 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp11Q99K46 Llgl2-212ENSMUST00000177736 3612 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
Usp11Q99K46 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp11Q99K46 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp11Q99K46 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Usp11Q99K46 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp11Q99K46 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Usp11Q99K46 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC14.41□□□□□ -0.1
Usp11Q99K46 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp11Q99K46 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Usp11Q99K46 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
Usp11Q99K46 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp11Q99K46 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Usp11Q99K46 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp11Q99K46 Rad17-202ENSMUST00000177848 2392 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp11Q99K46 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Usp11Q99K46 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp11Q99K46 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC14.4□□□□□ -0.1
Usp11Q99K46 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp11Q99K46 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
Usp11Q99K46 Gm38346-201ENSMUST00000192379 2639 ntBASIC14.4□□□□□ -0.1
Usp11Q99K46 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Usp11Q99K46 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Usp11Q99K46 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC14.4□□□□□ -0.1
Usp11Q99K46 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Usp11Q99K46 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC14.4□□□□□ -0.1
Usp11Q99K46 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC14.4□□□□□ -0.1
Usp11Q99K46 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC14.4□□□□□ -0.1
Usp11Q99K46 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
Usp11Q99K46 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Usp11Q99K46 Gm8584-201ENSMUST00000171982 758 ntBASIC14.4□□□□□ -0.1
Usp11Q99K46 Gm10576-201ENSMUST00000191927 825 ntBASIC14.4□□□□□ -0.1
Usp11Q99K46 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC14.4□□□□□ -0.1
Usp11Q99K46 Gm46209-201ENSMUST00000217912 553 ntBASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms