Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC13.26□□□□□ -0.29
Pcdhga11Q91XY8 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC13.26□□□□□ -0.29
Pcdhga11Q91XY8 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhga11Q91XY8 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhga11Q91XY8 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhga11Q91XY8 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhga11Q91XY8 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhga11Q91XY8 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhga11Q91XY8 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhga11Q91XY8 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC13.26□□□□□ -0.29
Pcdhga11Q91XY8 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhga11Q91XY8 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
Pcdhga11Q91XY8 Glis2-201ENSMUST00000014447 3619 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhga11Q91XY8 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhga11Q91XY8 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC13.26□□□□□ -0.29
Pcdhga11Q91XY8 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Pcdhga11Q91XY8 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhga11Q91XY8 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhga11Q91XY8 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhga11Q91XY8 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhga11Q91XY8 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhga11Q91XY8 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhga11Q91XY8 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhga11Q91XY8 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhga11Q91XY8 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC13.25□□□□□ -0.29
Pcdhga11Q91XY8 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhga11Q91XY8 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Pcdhga11Q91XY8 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhga11Q91XY8 Gm10729-202ENSMUST00000193403 1375 ntBASIC13.25□□□□□ -0.29
Pcdhga11Q91XY8 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhga11Q91XY8 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhga11Q91XY8 Gm6415-201ENSMUST00000118488 348 ntBASIC13.25□□□□□ -0.29
Pcdhga11Q91XY8 Nmi-205ENSMUST00000145481 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhga11Q91XY8 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Pcdhga11Q91XY8 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Pcdhga11Q91XY8 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Pcdhga11Q91XY8 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhga11Q91XY8 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC13.25□□□□□ -0.29
Pcdhga11Q91XY8 Gm28630-201ENSMUST00000187806 498 ntBASIC13.25□□□□□ -0.29
Pcdhga11Q91XY8 Gm33320-201ENSMUST00000192232 530 ntBASIC13.25□□□□□ -0.29
Pcdhga11Q91XY8 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhga11Q91XY8 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhga11Q91XY8 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhga11Q91XY8 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhga11Q91XY8 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhga11Q91XY8 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhga11Q91XY8 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Pcdhga11Q91XY8 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Pcdhga11Q91XY8 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhga11Q91XY8 Gm2420-202ENSMUST00000202224 2249 ntBASIC13.25□□□□□ -0.29
Pcdhga11Q91XY8 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhga11Q91XY8 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhga11Q91XY8 Mettl3-201ENSMUST00000022767 2025 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhga11Q91XY8 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhga11Q91XY8 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhga11Q91XY8 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Pcdhga11Q91XY8 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Pcdhga11Q91XY8 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhga11Q91XY8 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Pcdhga11Q91XY8 Gm44065-201ENSMUST00000203184 3527 ntBASIC13.25□□□□□ -0.29
Pcdhga11Q91XY8 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhga11Q91XY8 Gm18244-201ENSMUST00000219747 1566 ntBASIC13.24□□□□□ -0.29
Pcdhga11Q91XY8 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhga11Q91XY8 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhga11Q91XY8 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhga11Q91XY8 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
Pcdhga11Q91XY8 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhga11Q91XY8 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
Pcdhga11Q91XY8 Gm4780-202ENSMUST00000215200 2644 ntBASIC13.24□□□□□ -0.29
Pcdhga11Q91XY8 Gm27196-201ENSMUST00000184787 2582 ntBASIC13.24□□□□□ -0.29
Pcdhga11Q91XY8 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhga11Q91XY8 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC13.24□□□□□ -0.29
Pcdhga11Q91XY8 Gm8410-201ENSMUST00000117225 605 ntBASIC13.24□□□□□ -0.29
Pcdhga11Q91XY8 Gm12428-201ENSMUST00000119844 727 ntBASIC13.24□□□□□ -0.29
Pcdhga11Q91XY8 9530003J23Rik-202ENSMUST00000159193 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhga11Q91XY8 Gm25144-201ENSMUST00000179561 110 ntBASIC13.24□□□□□ -0.29
Pcdhga11Q91XY8 Gm25352-201ENSMUST00000179815 110 ntBASIC13.24□□□□□ -0.29
Pcdhga11Q91XY8 Mir7023-201ENSMUST00000185093 64 ntBASIC13.24□□□□□ -0.29
Pcdhga11Q91XY8 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Pcdhga11Q91XY8 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhga11Q91XY8 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhga11Q91XY8 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Pcdhga11Q91XY8 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC13.24□□□□□ -0.29
Pcdhga11Q91XY8 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhga11Q91XY8 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhga11Q91XY8 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhga11Q91XY8 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhga11Q91XY8 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC13.24□□□□□ -0.29
Pcdhga11Q91XY8 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhga11Q91XY8 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC13.24□□□□□ -0.29
Pcdhga11Q91XY8 Grk6-205ENSMUST00000224653 2976 ntBASIC13.24□□□□□ -0.29
Pcdhga11Q91XY8 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhga11Q91XY8 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhga11Q91XY8 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhga11Q91XY8 Slc8b1-204ENSMUST00000111890 2775 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhga11Q91XY8 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
Pcdhga11Q91XY8 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC13.24□□□□□ -0.29
Pcdhga11Q91XY8 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Pcdhga11Q91XY8 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC13.23□□□□□ -0.29
Pcdhga11Q91XY8 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 62.3 ms