Protein–RNA interactions for Protein: Q8K0T0

Rtn1, Reticulon-1, mousemouse

Predictions only

Length 780 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn1Q8K0T0 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Rtn1Q8K0T0 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC15.79■□□□□ 0.12
Rtn1Q8K0T0 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rtn1Q8K0T0 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Rtn1Q8K0T0 Prr33-201ENSMUST00000054910 2251 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rtn1Q8K0T0 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rtn1Q8K0T0 Pfkfb3-212ENSMUST00000170196 2163 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Rtn1Q8K0T0 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rtn1Q8K0T0 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Rtn1Q8K0T0 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rtn1Q8K0T0 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rtn1Q8K0T0 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rtn1Q8K0T0 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rtn1Q8K0T0 AC159649.2-201ENSMUST00000222984 3223 ntBASIC15.78■□□□□ 0.12
Rtn1Q8K0T0 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rtn1Q8K0T0 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rtn1Q8K0T0 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rtn1Q8K0T0 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rtn1Q8K0T0 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rtn1Q8K0T0 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Rtn1Q8K0T0 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC15.78■□□□□ 0.12
Rtn1Q8K0T0 Gm5866-201ENSMUST00000177881 973 ntBASIC15.78■□□□□ 0.12
Rtn1Q8K0T0 Gm43094-201ENSMUST00000196549 921 ntBASIC15.78■□□□□ 0.12
Rtn1Q8K0T0 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC15.78■□□□□ 0.12
Rtn1Q8K0T0 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC15.78■□□□□ 0.12
Rtn1Q8K0T0 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rtn1Q8K0T0 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rtn1Q8K0T0 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rtn1Q8K0T0 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Rtn1Q8K0T0 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Rtn1Q8K0T0 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rtn1Q8K0T0 Acot6-202ENSMUST00000222921 3622 ntBASIC15.78■□□□□ 0.12
Rtn1Q8K0T0 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rtn1Q8K0T0 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rtn1Q8K0T0 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rtn1Q8K0T0 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Rtn1Q8K0T0 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rtn1Q8K0T0 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rtn1Q8K0T0 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC15.78■□□□□ 0.12
Rtn1Q8K0T0 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Rtn1Q8K0T0 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rtn1Q8K0T0 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rtn1Q8K0T0 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rtn1Q8K0T0 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Rtn1Q8K0T0 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rtn1Q8K0T0 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Rtn1Q8K0T0 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rtn1Q8K0T0 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rtn1Q8K0T0 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rtn1Q8K0T0 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rtn1Q8K0T0 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rtn1Q8K0T0 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rtn1Q8K0T0 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rtn1Q8K0T0 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC15.77■□□□□ 0.12
Rtn1Q8K0T0 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Rtn1Q8K0T0 Gm7488-201ENSMUST00000117148 684 ntBASIC15.77■□□□□ 0.12
Rtn1Q8K0T0 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC15.77■□□□□ 0.12
Rtn1Q8K0T0 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC15.77■□□□□ 0.12
Rtn1Q8K0T0 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rtn1Q8K0T0 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Rtn1Q8K0T0 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC15.77■□□□□ 0.12
Rtn1Q8K0T0 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC15.77■□□□□ 0.12
Rtn1Q8K0T0 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Rtn1Q8K0T0 Erp29-201ENSMUST00000052590 1123 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Rtn1Q8K0T0 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Rtn1Q8K0T0 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Rtn1Q8K0T0 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Rtn1Q8K0T0 Gm11405-201ENSMUST00000118689 1556 ntBASIC15.77■□□□□ 0.11
Rtn1Q8K0T0 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rtn1Q8K0T0 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rtn1Q8K0T0 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC15.77■□□□□ 0.11
Rtn1Q8K0T0 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Rtn1Q8K0T0 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rtn1Q8K0T0 Gm14752-201ENSMUST00000120719 2075 ntBASIC15.77■□□□□ 0.11
Rtn1Q8K0T0 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rtn1Q8K0T0 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Rtn1Q8K0T0 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rtn1Q8K0T0 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Rtn1Q8K0T0 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC15.77■□□□□ 0.11
Rtn1Q8K0T0 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Rtn1Q8K0T0 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC15.77■□□□□ 0.11
Rtn1Q8K0T0 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Rtn1Q8K0T0 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC15.77■□□□□ 0.11
Rtn1Q8K0T0 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC15.76■□□□□ 0.11
Rtn1Q8K0T0 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rtn1Q8K0T0 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rtn1Q8K0T0 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Rtn1Q8K0T0 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC15.76■□□□□ 0.11
Rtn1Q8K0T0 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Rtn1Q8K0T0 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rtn1Q8K0T0 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rtn1Q8K0T0 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rtn1Q8K0T0 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Rtn1Q8K0T0 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Rtn1Q8K0T0 Gm15376-201ENSMUST00000122258 783 ntBASIC15.76■□□□□ 0.11
Rtn1Q8K0T0 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Rtn1Q8K0T0 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC15.76■□□□□ 0.11
Rtn1Q8K0T0 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Rtn1Q8K0T0 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Rtn1Q8K0T0 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms