Protein–RNA interactions for Protein: Q8CBG9

Rnf170, E3 ubiquitin-protein ligase RNF170, mousemouse

Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf170Q8CBG9 Gm25086-201ENSMUST00000179931 110 ntBASIC11.6□□□□□ -0.55
Rnf170Q8CBG9 Gm23243-201ENSMUST00000180047 110 ntBASIC11.6□□□□□ -0.55
Rnf170Q8CBG9 Gm24659-201ENSMUST00000180212 110 ntBASIC11.6□□□□□ -0.55
Rnf170Q8CBG9 Gm24169-201ENSMUST00000180244 110 ntBASIC11.6□□□□□ -0.55
Rnf170Q8CBG9 Gm23689-201ENSMUST00000180354 110 ntBASIC11.6□□□□□ -0.55
Rnf170Q8CBG9 Gm27359-201ENSMUST00000184153 110 ntBASIC11.6□□□□□ -0.55
Rnf170Q8CBG9 Gm27785-201ENSMUST00000184268 110 ntBASIC11.6□□□□□ -0.55
Rnf170Q8CBG9 Gm27466-201ENSMUST00000184396 110 ntBASIC11.6□□□□□ -0.55
Rnf170Q8CBG9 Gm27703-201ENSMUST00000184836 110 ntBASIC11.6□□□□□ -0.55
Rnf170Q8CBG9 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf170Q8CBG9 AC140397.2-201ENSMUST00000224213 834 ntBASIC11.6□□□□□ -0.55
Rnf170Q8CBG9 AC149588.3-201ENSMUST00000227515 150 ntBASIC11.6□□□□□ -0.55
Rnf170Q8CBG9 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf170Q8CBG9 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC11.6□□□□□ -0.55
Rnf170Q8CBG9 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC11.6□□□□□ -0.55
Rnf170Q8CBG9 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf170Q8CBG9 Trio-201ENSMUST00000090247 11495 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Rnf170Q8CBG9 Fn1-213ENSMUST00000188674 7680 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf170Q8CBG9 Fn1-217ENSMUST00000190780 7694 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf170Q8CBG9 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf170Q8CBG9 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf170Q8CBG9 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf170Q8CBG9 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf170Q8CBG9 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf170Q8CBG9 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Rnf170Q8CBG9 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Rnf170Q8CBG9 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf170Q8CBG9 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC11.6□□□□□ -0.55
Rnf170Q8CBG9 S1pr3-201ENSMUST00000087978 4463 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf170Q8CBG9 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC11.6□□□□□ -0.55
Rnf170Q8CBG9 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf170Q8CBG9 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf170Q8CBG9 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf170Q8CBG9 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Rnf170Q8CBG9 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf170Q8CBG9 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC11.59□□□□□ -0.55
Rnf170Q8CBG9 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC11.59□□□□□ -0.55
Rnf170Q8CBG9 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf170Q8CBG9 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf170Q8CBG9 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf170Q8CBG9 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf170Q8CBG9 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf170Q8CBG9 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf170Q8CBG9 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf170Q8CBG9 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC11.59□□□□□ -0.55
Rnf170Q8CBG9 Sox17-206ENSMUST00000192650 3242 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf170Q8CBG9 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Rnf170Q8CBG9 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Rnf170Q8CBG9 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf170Q8CBG9 Il17re-202ENSMUST00000058548 2940 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf170Q8CBG9 Kdm2a-201ENSMUST00000047898 8578 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf170Q8CBG9 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC11.59□□□□□ -0.55
Rnf170Q8CBG9 Gm15957-201ENSMUST00000118893 974 ntBASIC11.59□□□□□ -0.55
Rnf170Q8CBG9 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC11.59□□□□□ -0.55
Rnf170Q8CBG9 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf170Q8CBG9 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC11.59□□□□□ -0.55
Rnf170Q8CBG9 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf170Q8CBG9 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf170Q8CBG9 Runx1t1-204ENSMUST00000105566 6090 ntAPPRIS ALT1 TSL 5 BASIC11.59□□□□□ -0.55
Rnf170Q8CBG9 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC11.59□□□□□ -0.55
Rnf170Q8CBG9 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf170Q8CBG9 Elmsan1-201ENSMUST00000046266 6848 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf170Q8CBG9 1700010B13Rik-202ENSMUST00000189435 1549 ntTSL 3 BASIC11.59□□□□□ -0.55
Rnf170Q8CBG9 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf170Q8CBG9 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf170Q8CBG9 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf170Q8CBG9 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf170Q8CBG9 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf170Q8CBG9 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Rnf170Q8CBG9 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Rnf170Q8CBG9 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
Rnf170Q8CBG9 Gm45751-201ENSMUST00000210185 1573 ntBASIC11.58□□□□□ -0.55
Rnf170Q8CBG9 AC154262.2-201ENSMUST00000224310 2293 ntBASIC11.58□□□□□ -0.55
Rnf170Q8CBG9 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rnf170Q8CBG9 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Rnf170Q8CBG9 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rnf170Q8CBG9 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rnf170Q8CBG9 Gm13517-201ENSMUST00000120782 1495 ntBASIC11.58□□□□□ -0.56
Rnf170Q8CBG9 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rnf170Q8CBG9 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rnf170Q8CBG9 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rnf170Q8CBG9 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rnf170Q8CBG9 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rnf170Q8CBG9 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rnf170Q8CBG9 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rnf170Q8CBG9 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rnf170Q8CBG9 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
Rnf170Q8CBG9 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC11.58□□□□□ -0.56
Rnf170Q8CBG9 Mtus2-203ENSMUST00000085558 7543 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Rnf170Q8CBG9 Igfn1-203ENSMUST00000166193 8989 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rnf170Q8CBG9 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rnf170Q8CBG9 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rnf170Q8CBG9 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC11.58□□□□□ -0.56
Rnf170Q8CBG9 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC11.58□□□□□ -0.56
Rnf170Q8CBG9 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Rnf170Q8CBG9 Gm8410-201ENSMUST00000117225 605 ntBASIC11.58□□□□□ -0.56
Rnf170Q8CBG9 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC11.58□□□□□ -0.56
Rnf170Q8CBG9 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC11.58□□□□□ -0.56
Rnf170Q8CBG9 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Rnf170Q8CBG9 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 40.7 ms