Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc116Q80X53 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc116Q80X53 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc116Q80X53 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc116Q80X53 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc116Q80X53 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC13.41□□□□□ -0.26
Ccdc116Q80X53 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.41□□□□□ -0.26
Ccdc116Q80X53 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc116Q80X53 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc116Q80X53 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc116Q80X53 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC13.41□□□□□ -0.26
Ccdc116Q80X53 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc116Q80X53 Gm12585-201ENSMUST00000117307 290 ntBASIC13.41□□□□□ -0.26
Ccdc116Q80X53 Gm4875-201ENSMUST00000118257 786 ntBASIC13.41□□□□□ -0.26
Ccdc116Q80X53 Gm28819-201ENSMUST00000186691 572 ntTSL 5 BASIC13.41□□□□□ -0.26
Ccdc116Q80X53 Gm28840-208ENSMUST00000191514 738 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc116Q80X53 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc116Q80X53 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC13.41□□□□□ -0.26
Ccdc116Q80X53 Gm44081-201ENSMUST00000204406 643 ntTSL 3 BASIC13.41□□□□□ -0.26
Ccdc116Q80X53 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC13.41□□□□□ -0.26
Ccdc116Q80X53 AC073947.1-201ENSMUST00000216991 649 ntBASIC13.41□□□□□ -0.26
Ccdc116Q80X53 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC13.41□□□□□ -0.26
Ccdc116Q80X53 Snrnp25-201ENSMUST00000039601 821 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc116Q80X53 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc116Q80X53 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc116Q80X53 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc116Q80X53 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc116Q80X53 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc116Q80X53 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc116Q80X53 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc116Q80X53 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc116Q80X53 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC13.41□□□□□ -0.26
Ccdc116Q80X53 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc116Q80X53 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc116Q80X53 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc116Q80X53 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc116Q80X53 Spata21-201ENSMUST00000051907 2526 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc116Q80X53 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Ccdc116Q80X53 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc116Q80X53 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc116Q80X53 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc116Q80X53 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
Ccdc116Q80X53 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc116Q80X53 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc116Q80X53 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc116Q80X53 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc116Q80X53 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc116Q80X53 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC13.4□□□□□ -0.26
Ccdc116Q80X53 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc116Q80X53 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc116Q80X53 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC13.4□□□□□ -0.26
Ccdc116Q80X53 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC13.4□□□□□ -0.26
Ccdc116Q80X53 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc116Q80X53 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc116Q80X53 Gm4804-201ENSMUST00000182234 999 ntBASIC13.4□□□□□ -0.26
Ccdc116Q80X53 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC13.4□□□□□ -0.26
Ccdc116Q80X53 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc116Q80X53 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC13.4□□□□□ -0.26
Ccdc116Q80X53 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Ccdc116Q80X53 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc116Q80X53 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc116Q80X53 Rbm33-202ENSMUST00000059644 9510 ntAPPRIS P2 TSL 5 BASIC13.4□□□□□ -0.26
Ccdc116Q80X53 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc116Q80X53 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Ccdc116Q80X53 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
Ccdc116Q80X53 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc116Q80X53 AC124751.1-201ENSMUST00000222716 1408 ntBASIC13.39□□□□□ -0.27
Ccdc116Q80X53 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
Ccdc116Q80X53 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc116Q80X53 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc116Q80X53 Adk-207ENSMUST00000224069 1818 ntAPPRIS ALT1 BASIC13.39□□□□□ -0.27
Ccdc116Q80X53 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc116Q80X53 Gm45242-201ENSMUST00000210666 2129 ntBASIC13.39□□□□□ -0.27
Ccdc116Q80X53 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc116Q80X53 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc116Q80X53 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc116Q80X53 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
Ccdc116Q80X53 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc116Q80X53 Gm15240-201ENSMUST00000118156 720 ntBASIC13.39□□□□□ -0.27
Ccdc116Q80X53 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC13.39□□□□□ -0.27
Ccdc116Q80X53 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC13.39□□□□□ -0.27
Ccdc116Q80X53 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc116Q80X53 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc116Q80X53 AC126408.1-201ENSMUST00000225184 523 ntBASIC13.39□□□□□ -0.27
Ccdc116Q80X53 Lcn5-201ENSMUST00000028306 696 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc116Q80X53 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc116Q80X53 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Ccdc116Q80X53 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC13.39□□□□□ -0.27
Ccdc116Q80X53 AC139350.1-201ENSMUST00000227064 1594 ntBASIC13.39□□□□□ -0.27
Ccdc116Q80X53 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc116Q80X53 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Ccdc116Q80X53 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc116Q80X53 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc116Q80X53 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc116Q80X53 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
Ccdc116Q80X53 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc116Q80X53 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC13.39□□□□□ -0.27
Ccdc116Q80X53 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Ccdc116Q80X53 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Ccdc116Q80X53 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms