Protein–RNA interactions for Protein: Q6NSQ5

Sp140, Sp140 nuclear body protein, mousemouse

Predictions only

Length 534 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sp140Q6NSQ5 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sp140Q6NSQ5 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Sp140Q6NSQ5 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sp140Q6NSQ5 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Sp140Q6NSQ5 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sp140Q6NSQ5 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sp140Q6NSQ5 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sp140Q6NSQ5 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sp140Q6NSQ5 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sp140Q6NSQ5 Klhl12-201ENSMUST00000027725 3408 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sp140Q6NSQ5 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sp140Q6NSQ5 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sp140Q6NSQ5 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sp140Q6NSQ5 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Sp140Q6NSQ5 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sp140Q6NSQ5 Trappc6a-202ENSMUST00000108455 651 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Sp140Q6NSQ5 Gm14268-201ENSMUST00000132465 682 ntTSL 3 BASIC13.88□□□□□ -0.19
Sp140Q6NSQ5 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
Sp140Q6NSQ5 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Sp140Q6NSQ5 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sp140Q6NSQ5 Gm44719-201ENSMUST00000206404 149 ntBASIC13.88□□□□□ -0.19
Sp140Q6NSQ5 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC13.88□□□□□ -0.19
Sp140Q6NSQ5 AC154846.1-201ENSMUST00000226278 862 ntBASIC13.88□□□□□ -0.19
Sp140Q6NSQ5 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sp140Q6NSQ5 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sp140Q6NSQ5 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sp140Q6NSQ5 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sp140Q6NSQ5 Ifng-201ENSMUST00000068592 1208 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sp140Q6NSQ5 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Sp140Q6NSQ5 AC154725.1-201ENSMUST00000224826 1961 ntBASIC13.88□□□□□ -0.19
Sp140Q6NSQ5 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sp140Q6NSQ5 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sp140Q6NSQ5 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
Sp140Q6NSQ5 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC13.88□□□□□ -0.19
Sp140Q6NSQ5 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sp140Q6NSQ5 Prmt2-201ENSMUST00000020452 2016 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sp140Q6NSQ5 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sp140Q6NSQ5 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Sp140Q6NSQ5 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Sp140Q6NSQ5 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Sp140Q6NSQ5 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sp140Q6NSQ5 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sp140Q6NSQ5 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sp140Q6NSQ5 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC13.87□□□□□ -0.19
Sp140Q6NSQ5 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sp140Q6NSQ5 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Sp140Q6NSQ5 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sp140Q6NSQ5 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC13.87□□□□□ -0.19
Sp140Q6NSQ5 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Sp140Q6NSQ5 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Sp140Q6NSQ5 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sp140Q6NSQ5 Gm14371-201ENSMUST00000138925 1518 ntBASIC13.87□□□□□ -0.19
Sp140Q6NSQ5 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sp140Q6NSQ5 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC13.87□□□□□ -0.19
Sp140Q6NSQ5 Gm4204-201ENSMUST00000110798 1231 ntBASIC13.87□□□□□ -0.19
Sp140Q6NSQ5 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sp140Q6NSQ5 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC13.87□□□□□ -0.19
Sp140Q6NSQ5 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Sp140Q6NSQ5 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Sp140Q6NSQ5 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC13.87□□□□□ -0.19
Sp140Q6NSQ5 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sp140Q6NSQ5 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sp140Q6NSQ5 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Sp140Q6NSQ5 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Sp140Q6NSQ5 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sp140Q6NSQ5 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sp140Q6NSQ5 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Sp140Q6NSQ5 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
Sp140Q6NSQ5 AC139054.1-201ENSMUST00000226898 1598 ntBASIC13.87□□□□□ -0.19
Sp140Q6NSQ5 AC159621.2-201ENSMUST00000223519 1326 ntBASIC13.87□□□□□ -0.19
Sp140Q6NSQ5 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Sp140Q6NSQ5 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sp140Q6NSQ5 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sp140Q6NSQ5 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Sp140Q6NSQ5 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sp140Q6NSQ5 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sp140Q6NSQ5 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sp140Q6NSQ5 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sp140Q6NSQ5 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Sp140Q6NSQ5 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sp140Q6NSQ5 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Sp140Q6NSQ5 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sp140Q6NSQ5 Gm29253-201ENSMUST00000185727 5231 ntTSL 5 BASIC13.86□□□□□ -0.19
Sp140Q6NSQ5 Slc6a21-206ENSMUST00000210861 2838 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Sp140Q6NSQ5 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sp140Q6NSQ5 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sp140Q6NSQ5 Trbc1-201ENSMUST00000103291 512 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Sp140Q6NSQ5 Trbc2-201ENSMUST00000103299 692 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Sp140Q6NSQ5 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC13.86□□□□□ -0.19
Sp140Q6NSQ5 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC13.86□□□□□ -0.19
Sp140Q6NSQ5 Skiv2l-ps1-201ENSMUST00000173935 658 ntBASIC13.86□□□□□ -0.19
Sp140Q6NSQ5 Mir6956-201ENSMUST00000183598 62 ntBASIC13.86□□□□□ -0.19
Sp140Q6NSQ5 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Sp140Q6NSQ5 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sp140Q6NSQ5 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC13.86□□□□□ -0.19
Sp140Q6NSQ5 Batf3-201ENSMUST00000027943 801 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sp140Q6NSQ5 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Sp140Q6NSQ5 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
Sp140Q6NSQ5 AC168058.1-201ENSMUST00000219521 2282 ntBASIC13.86□□□□□ -0.19
Sp140Q6NSQ5 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 32 ms