Protein–RNA interactions for Protein: Q64347

Clcn1, Chloride channel protein 1, mousemouse

Predictions only

Length 994 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn1Q64347 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Clcn1Q64347 Gm2639-201ENSMUST00000156881 1297 ntBASIC17.28■□□□□ 0.36
Clcn1Q64347 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Clcn1Q64347 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Clcn1Q64347 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Clcn1Q64347 Gm26618-201ENSMUST00000181123 497 ntTSL 2 BASIC17.28■□□□□ 0.36
Clcn1Q64347 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Clcn1Q64347 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Clcn1Q64347 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC17.28■□□□□ 0.36
Clcn1Q64347 AC154171.1-201ENSMUST00000224610 643 ntBASIC17.28■□□□□ 0.36
Clcn1Q64347 Adarb1-202ENSMUST00000098374 6584 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Clcn1Q64347 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
Clcn1Q64347 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC17.28■□□□□ 0.36
Clcn1Q64347 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Clcn1Q64347 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Clcn1Q64347 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Clcn1Q64347 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Clcn1Q64347 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Clcn1Q64347 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC17.28■□□□□ 0.36
Clcn1Q64347 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
Clcn1Q64347 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.36
Clcn1Q64347 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
Clcn1Q64347 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Clcn1Q64347 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Clcn1Q64347 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
Clcn1Q64347 Gm12203-201ENSMUST00000118235 598 ntBASIC17.27■□□□□ 0.36
Clcn1Q64347 Gm12209-201ENSMUST00000120089 596 ntBASIC17.27■□□□□ 0.36
Clcn1Q64347 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Clcn1Q64347 Gm27516-201ENSMUST00000184237 98 ntBASIC17.27■□□□□ 0.36
Clcn1Q64347 Gm19309-201ENSMUST00000218295 205 ntBASIC17.27■□□□□ 0.36
Clcn1Q64347 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
Clcn1Q64347 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Clcn1Q64347 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
Clcn1Q64347 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Clcn1Q64347 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC17.27■□□□□ 0.35
Clcn1Q64347 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
Clcn1Q64347 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC17.27■□□□□ 0.35
Clcn1Q64347 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC17.26■□□□□ 0.35
Clcn1Q64347 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Clcn1Q64347 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Clcn1Q64347 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Clcn1Q64347 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Clcn1Q64347 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Clcn1Q64347 Snap25-202ENSMUST00000110098 1014 ntAPPRIS ALT1 TSL 3 BASIC17.26■□□□□ 0.35
Clcn1Q64347 Gm10156-201ENSMUST00000122364 462 ntBASIC17.26■□□□□ 0.35
Clcn1Q64347 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Clcn1Q64347 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC17.26■□□□□ 0.35
Clcn1Q64347 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC17.26■□□□□ 0.35
Clcn1Q64347 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Clcn1Q64347 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC17.26■□□□□ 0.35
Clcn1Q64347 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC17.26■□□□□ 0.35
Clcn1Q64347 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC17.26■□□□□ 0.35
Clcn1Q64347 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Clcn1Q64347 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Clcn1Q64347 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Clcn1Q64347 Gm24526-201ENSMUST00000082921 158 ntBASIC17.26■□□□□ 0.35
Clcn1Q64347 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Clcn1Q64347 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
Clcn1Q64347 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
Clcn1Q64347 Islr2-201ENSMUST00000114144 3880 ntAPPRIS P3 TSL 2 BASIC17.26■□□□□ 0.35
Clcn1Q64347 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Clcn1Q64347 Gm10339-203ENSMUST00000225409 1671 ntBASIC17.26■□□□□ 0.35
Clcn1Q64347 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
Clcn1Q64347 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
Clcn1Q64347 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clcn1Q64347 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clcn1Q64347 Gm13730-201ENSMUST00000121036 1462 ntBASIC17.25■□□□□ 0.35
Clcn1Q64347 Clptm1-201ENSMUST00000055242 4143 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clcn1Q64347 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Clcn1Q64347 Ric8b-202ENSMUST00000095385 2909 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clcn1Q64347 Cpped1-203ENSMUST00000121750 2614 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Clcn1Q64347 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC17.25■□□□□ 0.35
Clcn1Q64347 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clcn1Q64347 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clcn1Q64347 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clcn1Q64347 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Clcn1Q64347 Arhgef5-201ENSMUST00000031750 5469 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
Clcn1Q64347 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clcn1Q64347 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clcn1Q64347 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clcn1Q64347 Brsk2-204ENSMUST00000105989 2149 ntAPPRIS P4 TSL 5 BASIC17.25■□□□□ 0.35
Clcn1Q64347 Pkig-203ENSMUST00000109400 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clcn1Q64347 Gm13323-201ENSMUST00000120245 1151 ntBASIC17.25■□□□□ 0.35
Clcn1Q64347 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
Clcn1Q64347 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC17.25■□□□□ 0.35
Clcn1Q64347 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC17.25■□□□□ 0.35
Clcn1Q64347 Gm19184-201ENSMUST00000196798 928 ntBASIC17.25■□□□□ 0.35
Clcn1Q64347 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC17.25■□□□□ 0.35
Clcn1Q64347 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC17.25■□□□□ 0.35
Clcn1Q64347 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clcn1Q64347 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clcn1Q64347 Ier3-201ENSMUST00000003635 1131 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clcn1Q64347 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clcn1Q64347 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clcn1Q64347 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clcn1Q64347 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clcn1Q64347 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clcn1Q64347 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clcn1Q64347 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
Clcn1Q64347 Zkscan14-203ENSMUST00000198959 2243 ntBASIC17.25■□□□□ 0.35
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms