Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Scn9aQ62205 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Scn9aQ62205 Atp5d-202ENSMUST00000105366 781 ntTSL 2 BASIC15.78■□□□□ 0.12
Scn9aQ62205 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Scn9aQ62205 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Scn9aQ62205 n-R5s77-201ENSMUST00000083757 119 ntBASIC15.78■□□□□ 0.12
Scn9aQ62205 Fam46a-202ENSMUST00000187711 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Scn9aQ62205 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Scn9aQ62205 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Scn9aQ62205 Lexm-204ENSMUST00000189032 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Scn9aQ62205 Ppp1r1b-206ENSMUST00000150762 1801 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Scn9aQ62205 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Scn9aQ62205 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Scn9aQ62205 Tmed9-203ENSMUST00000224741 1450 ntBASIC15.78■□□□□ 0.12
Scn9aQ62205 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Scn9aQ62205 Apol6-206ENSMUST00000149569 2315 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Scn9aQ62205 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Scn9aQ62205 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
Scn9aQ62205 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.12
Scn9aQ62205 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Scn9aQ62205 Gm10451-201ENSMUST00000101281 1598 ntTSL 2 BASIC15.77■□□□□ 0.12
Scn9aQ62205 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Scn9aQ62205 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Scn9aQ62205 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC15.77■□□□□ 0.12
Scn9aQ62205 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC15.77■□□□□ 0.12
Scn9aQ62205 Gm11331-201ENSMUST00000119764 288 ntBASIC15.77■□□□□ 0.12
Scn9aQ62205 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC15.77■□□□□ 0.12
Scn9aQ62205 Gm3625-201ENSMUST00000170816 102 ntAPPRIS P1 BASIC15.77■□□□□ 0.12
Scn9aQ62205 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC15.77■□□□□ 0.12
Scn9aQ62205 AC069562.3-201ENSMUST00000225387 587 ntBASIC15.77■□□□□ 0.12
Scn9aQ62205 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Scn9aQ62205 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.12
Scn9aQ62205 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Scn9aQ62205 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Scn9aQ62205 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Scn9aQ62205 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Scn9aQ62205 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Scn9aQ62205 Nptx1-201ENSMUST00000026670 5217 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Scn9aQ62205 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC15.77■□□□□ 0.11
Scn9aQ62205 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC15.77■□□□□ 0.11
Scn9aQ62205 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Scn9aQ62205 Gm18556-201ENSMUST00000219748 1031 ntBASIC15.76■□□□□ 0.11
Scn9aQ62205 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Scn9aQ62205 Gm19221-201ENSMUST00000221827 1477 ntBASIC15.76■□□□□ 0.11
Scn9aQ62205 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Scn9aQ62205 Rgs17-203ENSMUST00000117676 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Scn9aQ62205 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Scn9aQ62205 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Scn9aQ62205 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC15.76■□□□□ 0.11
Scn9aQ62205 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Scn9aQ62205 Mmp14-201ENSMUST00000089688 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Scn9aQ62205 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Scn9aQ62205 Hnrnpr-204ENSMUST00000131671 2543 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Scn9aQ62205 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC15.76■□□□□ 0.11
Scn9aQ62205 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Scn9aQ62205 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Scn9aQ62205 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Scn9aQ62205 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Scn9aQ62205 Ggnbp1-202ENSMUST00000122106 1107 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.11
Scn9aQ62205 Gm16555-201ENSMUST00000159971 1199 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Scn9aQ62205 Gm42997-202ENSMUST00000200321 985 ntBASIC15.76■□□□□ 0.11
Scn9aQ62205 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC15.76■□□□□ 0.11
Scn9aQ62205 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Scn9aQ62205 Gm19963-201ENSMUST00000208413 1255 ntBASIC15.76■□□□□ 0.11
Scn9aQ62205 Bscl2-210ENSMUST00000171649 1962 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Scn9aQ62205 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Scn9aQ62205 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Scn9aQ62205 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Scn9aQ62205 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Scn9aQ62205 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Scn9aQ62205 Gm37736-201ENSMUST00000193564 2802 ntBASIC15.75■□□□□ 0.11
Scn9aQ62205 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC15.75■□□□□ 0.11
Scn9aQ62205 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Scn9aQ62205 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Scn9aQ62205 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Scn9aQ62205 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Scn9aQ62205 Gng2-205ENSMUST00000161247 419 ntAPPRIS P1 TSL 3 BASIC15.75■□□□□ 0.11
Scn9aQ62205 Gm27023-201ENSMUST00000182372 285 ntBASIC15.75■□□□□ 0.11
Scn9aQ62205 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC15.75■□□□□ 0.11
Scn9aQ62205 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC15.75■□□□□ 0.11
Scn9aQ62205 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC15.75■□□□□ 0.11
Scn9aQ62205 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Scn9aQ62205 Fbxl7-201ENSMUST00000059204 4632 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Scn9aQ62205 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Scn9aQ62205 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Scn9aQ62205 Tekt2-201ENSMUST00000030658 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Scn9aQ62205 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC15.75■□□□□ 0.11
Scn9aQ62205 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC15.75■□□□□ 0.11
Scn9aQ62205 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Scn9aQ62205 Ccdc28b-202ENSMUST00000106035 821 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Scn9aQ62205 Smyd3-202ENSMUST00000111134 1229 ntTSL 2 BASIC15.75■□□□□ 0.11
Scn9aQ62205 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Scn9aQ62205 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC15.74■□□□□ 0.11
Scn9aQ62205 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Scn9aQ62205 Ppp2r2b-203ENSMUST00000120632 2081 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
Scn9aQ62205 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC15.74■□□□□ 0.11
Scn9aQ62205 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Scn9aQ62205 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC15.74■□□□□ 0.11
Scn9aQ62205 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Scn9aQ62205 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 42.3 ms