Protein–RNA interactions for Protein: Q61382

Traf4, TNF receptor-associated factor 4, mousemouse

Predictions only

Length 470 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf4Q61382 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC12.2□□□□□ -0.46
Traf4Q61382 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Traf4Q61382 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Traf4Q61382 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.2□□□□□ -0.46
Traf4Q61382 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Traf4Q61382 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Traf4Q61382 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Traf4Q61382 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC12.2□□□□□ -0.46
Traf4Q61382 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC12.2□□□□□ -0.46
Traf4Q61382 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Traf4Q61382 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Traf4Q61382 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC12.2□□□□□ -0.46
Traf4Q61382 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Traf4Q61382 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC12.2□□□□□ -0.46
Traf4Q61382 Gm29667-201ENSMUST00000190817 490 ntBASIC12.2□□□□□ -0.46
Traf4Q61382 Gm43703-201ENSMUST00000200523 763 ntBASIC12.2□□□□□ -0.46
Traf4Q61382 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC12.2□□□□□ -0.46
Traf4Q61382 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Traf4Q61382 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Traf4Q61382 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Traf4Q61382 Parp16-201ENSMUST00000069000 2482 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Traf4Q61382 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Traf4Q61382 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC12.2□□□□□ -0.46
Traf4Q61382 Ska3-201ENSMUST00000022536 2260 ntAPPRIS P1 TSL 1 (best) BASIC12.2□□□□□ -0.46
Traf4Q61382 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Traf4Q61382 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Traf4Q61382 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Traf4Q61382 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Traf4Q61382 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Traf4Q61382 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Traf4Q61382 Ybx1-201ENSMUST00000079644 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Traf4Q61382 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Traf4Q61382 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Traf4Q61382 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC12.19□□□□□ -0.46
Traf4Q61382 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Traf4Q61382 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Traf4Q61382 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Traf4Q61382 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Traf4Q61382 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Traf4Q61382 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Traf4Q61382 Gm20633-201ENSMUST00000176742 2831 ntBASIC12.19□□□□□ -0.46
Traf4Q61382 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC12.19□□□□□ -0.46
Traf4Q61382 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Traf4Q61382 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC12.19□□□□□ -0.46
Traf4Q61382 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Traf4Q61382 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Traf4Q61382 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC12.19□□□□□ -0.46
Traf4Q61382 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Traf4Q61382 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC12.19□□□□□ -0.46
Traf4Q61382 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Traf4Q61382 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC12.19□□□□□ -0.46
Traf4Q61382 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.19□□□□□ -0.46
Traf4Q61382 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC12.19□□□□□ -0.46
Traf4Q61382 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Traf4Q61382 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Traf4Q61382 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.19□□□□□ -0.46
Traf4Q61382 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Traf4Q61382 Gck-203ENSMUST00000109823 2361 ntTSL 5 BASIC12.19□□□□□ -0.46
Traf4Q61382 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Traf4Q61382 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Traf4Q61382 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Traf4Q61382 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Traf4Q61382 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.19□□□□□ -0.46
Traf4Q61382 Phka1-204ENSMUST00000119229 6025 ntAPPRIS ALT2 TSL 5 BASIC12.19□□□□□ -0.46
Traf4Q61382 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Traf4Q61382 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Traf4Q61382 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC12.18□□□□□ -0.46
Traf4Q61382 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Traf4Q61382 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC12.18□□□□□ -0.46
Traf4Q61382 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Traf4Q61382 Gm6263-201ENSMUST00000120029 1342 ntBASIC12.18□□□□□ -0.46
Traf4Q61382 Ces2e-202ENSMUST00000109410 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Traf4Q61382 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Traf4Q61382 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Traf4Q61382 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Traf4Q61382 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Traf4Q61382 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Traf4Q61382 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC12.18□□□□□ -0.46
Traf4Q61382 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC12.18□□□□□ -0.46
Traf4Q61382 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC12.18□□□□□ -0.46
Traf4Q61382 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC12.18□□□□□ -0.46
Traf4Q61382 1700055C04Rik-201ENSMUST00000176450 355 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Traf4Q61382 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Traf4Q61382 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC12.18□□□□□ -0.46
Traf4Q61382 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC12.18□□□□□ -0.46
Traf4Q61382 Gm26953-206ENSMUST00000212840 619 ntTSL 5 BASIC12.18□□□□□ -0.46
Traf4Q61382 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC12.18□□□□□ -0.46
Traf4Q61382 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Traf4Q61382 Gm20445-201ENSMUST00000061905 565 ntBASIC12.18□□□□□ -0.46
Traf4Q61382 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Traf4Q61382 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC12.18□□□□□ -0.46
Traf4Q61382 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.18□□□□□ -0.46
Traf4Q61382 Pias2-201ENSMUST00000114776 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.18□□□□□ -0.46
Traf4Q61382 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Traf4Q61382 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Traf4Q61382 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC12.18□□□□□ -0.46
Traf4Q61382 Fam43a-201ENSMUST00000059078 3075 ntAPPRIS P1 BASIC12.18□□□□□ -0.46
Traf4Q61382 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.18□□□□□ -0.46
Traf4Q61382 Ilvbl-209ENSMUST00000218885 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.18□□□□□ -0.46
Traf4Q61382 Gm5639-201ENSMUST00000122305 2403 ntBASIC12.18□□□□□ -0.46
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms