Protein–RNA interactions for Protein: Q60769

Tnfaip3, Tumor necrosis factor alpha-induced protein 3, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfaip3Q60769 Smyd1-203ENSMUST00000114188 2064 ntTSL 5 BASIC12.88□□□□□ -0.35
Tnfaip3Q60769 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfaip3Q60769 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfaip3Q60769 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfaip3Q60769 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC12.88□□□□□ -0.35
Tnfaip3Q60769 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Tnfaip3Q60769 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfaip3Q60769 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfaip3Q60769 Plch2-208ENSMUST00000145662 1818 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfaip3Q60769 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfaip3Q60769 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Tnfaip3Q60769 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfaip3Q60769 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Tnfaip3Q60769 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tnfaip3Q60769 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC12.87□□□□□ -0.35
Tnfaip3Q60769 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tnfaip3Q60769 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Tnfaip3Q60769 Leng8-201ENSMUST00000037472 5105 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tnfaip3Q60769 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tnfaip3Q60769 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tnfaip3Q60769 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tnfaip3Q60769 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Tnfaip3Q60769 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tnfaip3Q60769 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC12.87□□□□□ -0.35
Tnfaip3Q60769 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC12.87□□□□□ -0.35
Tnfaip3Q60769 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tnfaip3Q60769 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tnfaip3Q60769 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tnfaip3Q60769 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tnfaip3Q60769 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC12.87□□□□□ -0.35
Tnfaip3Q60769 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Tnfaip3Q60769 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Tnfaip3Q60769 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Tnfaip3Q60769 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Tnfaip3Q60769 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Tnfaip3Q60769 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Tnfaip3Q60769 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tnfaip3Q60769 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Tnfaip3Q60769 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tnfaip3Q60769 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Tnfaip3Q60769 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tnfaip3Q60769 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tnfaip3Q60769 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tnfaip3Q60769 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tnfaip3Q60769 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tnfaip3Q60769 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tnfaip3Q60769 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tnfaip3Q60769 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tnfaip3Q60769 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Tnfaip3Q60769 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tnfaip3Q60769 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC12.86□□□□□ -0.35
Tnfaip3Q60769 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC12.86□□□□□ -0.35
Tnfaip3Q60769 1700030C10Rik-202ENSMUST00000186243 126 ntBASIC12.86□□□□□ -0.35
Tnfaip3Q60769 Blvra-201ENSMUST00000002064 1160 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tnfaip3Q60769 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tnfaip3Q60769 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tnfaip3Q60769 AC156560.2-201ENSMUST00000221232 264 ntBASIC12.86□□□□□ -0.35
Tnfaip3Q60769 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tnfaip3Q60769 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tnfaip3Q60769 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
Tnfaip3Q60769 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Tnfaip3Q60769 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Tnfaip3Q60769 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tnfaip3Q60769 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tnfaip3Q60769 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Tnfaip3Q60769 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Tnfaip3Q60769 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tnfaip3Q60769 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tnfaip3Q60769 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tnfaip3Q60769 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tnfaip3Q60769 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Tnfaip3Q60769 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tnfaip3Q60769 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tnfaip3Q60769 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Tnfaip3Q60769 Gm43056-201ENSMUST00000197865 2791 ntBASIC12.86□□□□□ -0.35
Tnfaip3Q60769 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tnfaip3Q60769 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Tnfaip3Q60769 Gm12500-202ENSMUST00000186471 2428 ntBASIC12.86□□□□□ -0.35
Tnfaip3Q60769 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tnfaip3Q60769 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC12.85□□□□□ -0.35
Tnfaip3Q60769 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Tnfaip3Q60769 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tnfaip3Q60769 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tnfaip3Q60769 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tnfaip3Q60769 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tnfaip3Q60769 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Tnfaip3Q60769 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC12.85□□□□□ -0.35
Tnfaip3Q60769 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tnfaip3Q60769 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tnfaip3Q60769 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC12.85□□□□□ -0.35
Tnfaip3Q60769 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tnfaip3Q60769 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Tnfaip3Q60769 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Tnfaip3Q60769 Gm11555-202ENSMUST00000104929 638 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Tnfaip3Q60769 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Tnfaip3Q60769 Gm12485-201ENSMUST00000119641 291 ntBASIC12.85□□□□□ -0.35
Tnfaip3Q60769 Gm11918-201ENSMUST00000121660 179 ntBASIC12.85□□□□□ -0.35
Tnfaip3Q60769 Gm14730-201ENSMUST00000122378 1045 ntBASIC12.85□□□□□ -0.35
Tnfaip3Q60769 Gm26464-201ENSMUST00000157094 305 ntBASIC12.85□□□□□ -0.35
Tnfaip3Q60769 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 67.3 ms