Protein–RNA interactions for Protein: Q08423

Tff1, Trefoil factor 1, mousemouse

Predictions only

Length 87 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tff1Q08423 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tff1Q08423 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tff1Q08423 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tff1Q08423 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tff1Q08423 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Tff1Q08423 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tff1Q08423 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Tff1Q08423 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Tff1Q08423 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
Tff1Q08423 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tff1Q08423 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
Tff1Q08423 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC11.38□□□□□ -0.59
Tff1Q08423 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
Tff1Q08423 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Tff1Q08423 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tff1Q08423 Gm42934-201ENSMUST00000196920 1345 ntBASIC11.37□□□□□ -0.59
Tff1Q08423 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tff1Q08423 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tff1Q08423 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tff1Q08423 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tff1Q08423 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tff1Q08423 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Tff1Q08423 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tff1Q08423 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tff1Q08423 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Tff1Q08423 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Tff1Q08423 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tff1Q08423 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Tff1Q08423 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tff1Q08423 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tff1Q08423 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tff1Q08423 Gm9824-201ENSMUST00000178707 561 ntBASIC11.37□□□□□ -0.59
Tff1Q08423 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Tff1Q08423 Mir7684-201ENSMUST00000183858 60 ntBASIC11.37□□□□□ -0.59
Tff1Q08423 Gm29310-201ENSMUST00000185468 696 ntBASIC11.37□□□□□ -0.59
Tff1Q08423 Gm21825-201ENSMUST00000185728 696 ntBASIC11.37□□□□□ -0.59
Tff1Q08423 Gm29109-201ENSMUST00000185895 696 ntBASIC11.37□□□□□ -0.59
Tff1Q08423 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC11.37□□□□□ -0.59
Tff1Q08423 Gm21896-201ENSMUST00000186520 696 ntBASIC11.37□□□□□ -0.59
Tff1Q08423 Gm21873-201ENSMUST00000186728 696 ntBASIC11.37□□□□□ -0.59
Tff1Q08423 Gm21794-201ENSMUST00000187056 696 ntBASIC11.37□□□□□ -0.59
Tff1Q08423 Gm21880-201ENSMUST00000187275 696 ntBASIC11.37□□□□□ -0.59
Tff1Q08423 Gm21826-201ENSMUST00000187451 696 ntBASIC11.37□□□□□ -0.59
Tff1Q08423 Gm21198-201ENSMUST00000188393 696 ntBASIC11.37□□□□□ -0.59
Tff1Q08423 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Tff1Q08423 Gm21749-201ENSMUST00000189343 696 ntBASIC11.37□□□□□ -0.59
Tff1Q08423 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
Tff1Q08423 Gm21901-201ENSMUST00000189568 696 ntBASIC11.37□□□□□ -0.59
Tff1Q08423 Gm29424-201ENSMUST00000189716 696 ntBASIC11.37□□□□□ -0.59
Tff1Q08423 Gm28599-201ENSMUST00000189838 694 ntBASIC11.37□□□□□ -0.59
Tff1Q08423 Gm21867-201ENSMUST00000189917 696 ntBASIC11.37□□□□□ -0.59
Tff1Q08423 Gm29269-201ENSMUST00000190087 696 ntBASIC11.37□□□□□ -0.59
Tff1Q08423 Gm21722-201ENSMUST00000190153 696 ntBASIC11.37□□□□□ -0.59
Tff1Q08423 Gm28423-201ENSMUST00000190701 696 ntBASIC11.37□□□□□ -0.59
Tff1Q08423 Gm21899-201ENSMUST00000190745 696 ntBASIC11.37□□□□□ -0.59
Tff1Q08423 Gm21910-201ENSMUST00000191163 696 ntBASIC11.37□□□□□ -0.59
Tff1Q08423 Gm21849-201ENSMUST00000191571 696 ntBASIC11.37□□□□□ -0.59
Tff1Q08423 Gm28678-201ENSMUST00000191593 696 ntBASIC11.37□□□□□ -0.59
Tff1Q08423 Gm20910-201ENSMUST00000193268 696 ntBASIC11.37□□□□□ -0.59
Tff1Q08423 Gm21871-201ENSMUST00000194621 696 ntBASIC11.37□□□□□ -0.59
Tff1Q08423 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC11.37□□□□□ -0.59
Tff1Q08423 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tff1Q08423 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC11.37□□□□□ -0.59
Tff1Q08423 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tff1Q08423 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Tff1Q08423 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tff1Q08423 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Tff1Q08423 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tff1Q08423 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tff1Q08423 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tff1Q08423 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC11.37□□□□□ -0.59
Tff1Q08423 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC11.37□□□□□ -0.59
Tff1Q08423 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Tff1Q08423 Chfr-201ENSMUST00000014812 3146 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tff1Q08423 Ak4-201ENSMUST00000102780 4186 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
Tff1Q08423 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tff1Q08423 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
Tff1Q08423 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
Tff1Q08423 Gm38346-201ENSMUST00000192379 2639 ntBASIC11.37□□□□□ -0.59
Tff1Q08423 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Tff1Q08423 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Tff1Q08423 Ccdc134-201ENSMUST00000089174 2043 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Tff1Q08423 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC11.36□□□□□ -0.59
Tff1Q08423 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Tff1Q08423 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Tff1Q08423 Wdr54-205ENSMUST00000153148 4634 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Tff1Q08423 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
Tff1Q08423 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Tff1Q08423 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
Tff1Q08423 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Tff1Q08423 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
Tff1Q08423 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Tff1Q08423 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Tff1Q08423 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC11.36□□□□□ -0.59
Tff1Q08423 AC154262.2-201ENSMUST00000224310 2293 ntBASIC11.36□□□□□ -0.59
Tff1Q08423 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Tff1Q08423 Gm13453-201ENSMUST00000118708 357 ntBASIC11.36□□□□□ -0.59
Tff1Q08423 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC11.36□□□□□ -0.59
Tff1Q08423 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC11.36□□□□□ -0.59
Tff1Q08423 Gm38225-201ENSMUST00000194001 393 ntBASIC11.36□□□□□ -0.59
Retrieved 100 of 76,532 protein–RNA pairs in 59.5 ms