Protein–RNA interactions for Protein: P58774

Tpm2, Tropomyosin beta chain, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm2P58774 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Tpm2P58774 Tmem38a-201ENSMUST00000034244 2124 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tpm2P58774 Myo10-202ENSMUST00000110457 8125 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tpm2P58774 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Tpm2P58774 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tpm2P58774 Gtf3c5-202ENSMUST00000113889 2667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tpm2P58774 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tpm2P58774 Slc7a10-203ENSMUST00000135452 629 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Tpm2P58774 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC15.7■□□□□ 0.1
Tpm2P58774 AC154572.2-201ENSMUST00000225105 997 ntBASIC15.7■□□□□ 0.1
Tpm2P58774 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
Tpm2P58774 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tpm2P58774 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Tpm2P58774 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Tpm2P58774 Slc27a2-201ENSMUST00000061491 2918 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tpm2P58774 Pop4-201ENSMUST00000032585 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tpm2P58774 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tpm2P58774 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Tpm2P58774 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Tpm2P58774 Stk32b-201ENSMUST00000094836 3458 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tpm2P58774 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tpm2P58774 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tpm2P58774 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Tpm2P58774 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Tpm2P58774 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tpm2P58774 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tpm2P58774 Dnajc24-201ENSMUST00000102555 1197 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tpm2P58774 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tpm2P58774 Bad-203ENSMUST00000113426 740 ntTSL 5 BASIC15.69■□□□□ 0.1
Tpm2P58774 Gm9385-201ENSMUST00000117563 472 ntBASIC15.69■□□□□ 0.1
Tpm2P58774 Gm11543-201ENSMUST00000120758 370 ntBASIC15.69■□□□□ 0.1
Tpm2P58774 Gm10275-202ENSMUST00000168697 495 ntBASIC15.69■□□□□ 0.1
Tpm2P58774 Gapdh-201ENSMUST00000073605 1272 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tpm2P58774 Gm10275-201ENSMUST00000092620 635 ntBASIC15.69■□□□□ 0.1
Tpm2P58774 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tpm2P58774 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC15.69■□□□□ 0.1
Tpm2P58774 AC154747.3-201ENSMUST00000224471 3470 ntBASIC15.69■□□□□ 0.1
Tpm2P58774 Minos1-203ENSMUST00000143971 2549 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tpm2P58774 Pnliprp2-201ENSMUST00000026081 1567 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tpm2P58774 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Tpm2P58774 Strada-201ENSMUST00000007444 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tpm2P58774 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Tpm2P58774 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Tpm2P58774 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Tpm2P58774 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tpm2P58774 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Tpm2P58774 Plxnb2-202ENSMUST00000109331 6377 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Tpm2P58774 Ctsa-203ENSMUST00000103093 2534 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tpm2P58774 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tpm2P58774 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tpm2P58774 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tpm2P58774 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tpm2P58774 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tpm2P58774 Abcb6-201ENSMUST00000027396 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tpm2P58774 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tpm2P58774 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tpm2P58774 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Tpm2P58774 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
Tpm2P58774 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tpm2P58774 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC15.68■□□□□ 0.1
Tpm2P58774 Fis1-202ENSMUST00000111094 948 ntTSL 2 BASIC15.68■□□□□ 0.1
Tpm2P58774 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC15.68■□□□□ 0.1
Tpm2P58774 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC15.68■□□□□ 0.1
Tpm2P58774 Gm15483-201ENSMUST00000120338 456 ntBASIC15.68■□□□□ 0.1
Tpm2P58774 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC15.68■□□□□ 0.1
Tpm2P58774 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC15.68■□□□□ 0.1
Tpm2P58774 Klk2-ps-201ENSMUST00000205342 571 ntBASIC15.68■□□□□ 0.1
Tpm2P58774 CT025555.1-201ENSMUST00000225901 1217 ntBASIC15.68■□□□□ 0.1
Tpm2P58774 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tpm2P58774 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tpm2P58774 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Tpm2P58774 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tpm2P58774 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tpm2P58774 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Tpm2P58774 Dlgap1-208ENSMUST00000135938 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tpm2P58774 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tpm2P58774 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tpm2P58774 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Tpm2P58774 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tpm2P58774 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Tpm2P58774 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tpm2P58774 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Tpm2P58774 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tpm2P58774 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tpm2P58774 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tpm2P58774 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tpm2P58774 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tpm2P58774 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tpm2P58774 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Tpm2P58774 Astn1-202ENSMUST00000170718 2927 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Tpm2P58774 Usp19-203ENSMUST00000166103 4473 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tpm2P58774 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Tpm2P58774 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tpm2P58774 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC15.67■□□□□ 0.1
Tpm2P58774 Gm27920-201ENSMUST00000183953 96 ntBASIC15.67■□□□□ 0.1
Tpm2P58774 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Tpm2P58774 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Tpm2P58774 Gm5712-201ENSMUST00000199748 1043 ntBASIC15.67■□□□□ 0.1
Tpm2P58774 Gm29909-201ENSMUST00000214500 922 ntTSL 5 BASIC15.67■□□□□ 0.1
Tpm2P58774 Gm7229-201ENSMUST00000214719 1007 ntBASIC15.67■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms