Protein–RNA interactions for Protein: P55288

Cdh11, Cadherin-11, mousemouse

Predictions only

Length 796 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh11P55288 Gm42466-201ENSMUST00000202099 1301 ntBASIC12.49□□□□□ -0.41
Cdh11P55288 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdh11P55288 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Cdh11P55288 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cdh11P55288 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cdh11P55288 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cdh11P55288 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cdh11P55288 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC12.49□□□□□ -0.41
Cdh11P55288 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Cdh11P55288 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdh11P55288 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Cdh11P55288 Mir6977-201ENSMUST00000184960 64 ntBASIC12.49□□□□□ -0.41
Cdh11P55288 Gm38294-201ENSMUST00000192831 381 ntBASIC12.49□□□□□ -0.41
Cdh11P55288 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cdh11P55288 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cdh11P55288 Rbfox2-208ENSMUST00000227930 1218 ntBASIC12.49□□□□□ -0.41
Cdh11P55288 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Cdh11P55288 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdh11P55288 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdh11P55288 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdh11P55288 Map10-201ENSMUST00000053078 3542 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Cdh11P55288 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Cdh11P55288 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Cdh11P55288 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdh11P55288 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdh11P55288 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC12.49□□□□□ -0.41
Cdh11P55288 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdh11P55288 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
Cdh11P55288 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdh11P55288 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Cdh11P55288 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cdh11P55288 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cdh11P55288 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Cdh11P55288 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdh11P55288 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Cdh11P55288 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cdh11P55288 Gnao1-203ENSMUST00000125716 3462 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdh11P55288 Spg7-202ENSMUST00000125975 2408 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Cdh11P55288 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdh11P55288 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC12.48□□□□□ -0.41
Cdh11P55288 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdh11P55288 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC12.48□□□□□ -0.41
Cdh11P55288 Gm6539-201ENSMUST00000119157 1064 ntBASIC12.48□□□□□ -0.41
Cdh11P55288 Gm12151-201ENSMUST00000121374 290 ntBASIC12.48□□□□□ -0.41
Cdh11P55288 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cdh11P55288 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cdh11P55288 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC12.48□□□□□ -0.41
Cdh11P55288 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC12.48□□□□□ -0.41
Cdh11P55288 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Cdh11P55288 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC12.48□□□□□ -0.41
Cdh11P55288 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cdh11P55288 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cdh11P55288 Ino80e-214ENSMUST00000206349 883 ntTSL 2 BASIC12.48□□□□□ -0.41
Cdh11P55288 AC131690.1-201ENSMUST00000218406 374 ntBASIC12.48□□□□□ -0.41
Cdh11P55288 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC12.48□□□□□ -0.41
Cdh11P55288 Apobec2-201ENSMUST00000046549 1218 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdh11P55288 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdh11P55288 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Cdh11P55288 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC12.48□□□□□ -0.41
Cdh11P55288 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC12.48□□□□□ -0.41
Cdh11P55288 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdh11P55288 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdh11P55288 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC12.48□□□□□ -0.41
Cdh11P55288 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Cdh11P55288 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdh11P55288 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Cdh11P55288 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdh11P55288 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Cdh11P55288 AC126549.2-201ENSMUST00000223997 1976 ntBASIC12.47□□□□□ -0.41
Cdh11P55288 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Cdh11P55288 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Cdh11P55288 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Cdh11P55288 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdh11P55288 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cdh11P55288 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdh11P55288 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC12.47□□□□□ -0.41
Cdh11P55288 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdh11P55288 Gm12428-201ENSMUST00000119844 727 ntBASIC12.47□□□□□ -0.41
Cdh11P55288 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC12.47□□□□□ -0.41
Cdh11P55288 Gm36536-201ENSMUST00000194241 959 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cdh11P55288 Gm5626-201ENSMUST00000222151 1058 ntBASIC12.47□□□□□ -0.41
Cdh11P55288 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC12.47□□□□□ -0.41
Cdh11P55288 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdh11P55288 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdh11P55288 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdh11P55288 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdh11P55288 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdh11P55288 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdh11P55288 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cdh11P55288 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdh11P55288 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC12.47□□□□□ -0.41
Cdh11P55288 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdh11P55288 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Cdh11P55288 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdh11P55288 Rasal3-201ENSMUST00000063824 3681 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Cdh11P55288 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdh11P55288 Mcm9-206ENSMUST00000220007 3513 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cdh11P55288 P4ha2-202ENSMUST00000093107 2263 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Cdh11P55288 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Cdh11P55288 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms