Protein–RNA interactions for Protein: P55066

Ncan, Neurocan core protein, mousemouse

Predictions only

Length 1,268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NcanP55066 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
NcanP55066 Ggnbp2-213ENSMUST00000172405 2950 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
NcanP55066 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC14.27□□□□□ -0.12
NcanP55066 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
NcanP55066 Slit1-203ENSMUST00000169141 5673 ntTSL 5 BASIC14.27□□□□□ -0.12
NcanP55066 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NcanP55066 Kifc5c-ps-201ENSMUST00000179040 1530 ntBASIC14.27□□□□□ -0.12
NcanP55066 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NcanP55066 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
NcanP55066 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
NcanP55066 CU062626.3-201ENSMUST00000225522 1411 ntBASIC14.27□□□□□ -0.12
NcanP55066 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
NcanP55066 Sparc-209ENSMUST00000216313 1304 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
NcanP55066 Gm10434-201ENSMUST00000101158 471 ntBASIC14.27□□□□□ -0.13
NcanP55066 Cabp1-203ENSMUST00000112112 746 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NcanP55066 1700003G13Rik-202ENSMUST00000131342 705 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
NcanP55066 Gm15276-201ENSMUST00000145953 498 ntBASIC14.27□□□□□ -0.13
NcanP55066 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
NcanP55066 Rhoc-204ENSMUST00000176347 583 ntTSL 5 BASIC14.27□□□□□ -0.13
NcanP55066 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC14.27□□□□□ -0.13
NcanP55066 Gm18730-201ENSMUST00000218038 343 ntBASIC14.27□□□□□ -0.13
NcanP55066 AC131690.1-201ENSMUST00000218406 374 ntBASIC14.27□□□□□ -0.13
NcanP55066 Treml1-205ENSMUST00000225849 974 ntAPPRIS ALT2 BASIC14.27□□□□□ -0.13
NcanP55066 Pf4-201ENSMUST00000031320 588 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NcanP55066 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NcanP55066 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC14.27□□□□□ -0.13
NcanP55066 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NcanP55066 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
NcanP55066 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NcanP55066 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NcanP55066 Sybu-209ENSMUST00000228639 4113 ntBASIC14.27□□□□□ -0.13
NcanP55066 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NcanP55066 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
NcanP55066 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NcanP55066 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC14.26□□□□□ -0.13
NcanP55066 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NcanP55066 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.26□□□□□ -0.13
NcanP55066 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NcanP55066 Eif4ebp2-202ENSMUST00000167087 1422 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
NcanP55066 CT010478.1-201ENSMUST00000220747 2787 ntBASIC14.26□□□□□ -0.13
NcanP55066 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NcanP55066 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC14.26□□□□□ -0.13
NcanP55066 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NcanP55066 AC079680.2-201ENSMUST00000219181 1306 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NcanP55066 Zp3-201ENSMUST00000005073 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NcanP55066 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC14.26□□□□□ -0.13
NcanP55066 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
NcanP55066 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NcanP55066 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC14.26□□□□□ -0.13
NcanP55066 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NcanP55066 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NcanP55066 Naa60-207ENSMUST00000150655 1166 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
NcanP55066 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NcanP55066 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NcanP55066 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NcanP55066 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NcanP55066 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
NcanP55066 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
NcanP55066 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
NcanP55066 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
NcanP55066 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NcanP55066 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
NcanP55066 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NcanP55066 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
NcanP55066 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
NcanP55066 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
NcanP55066 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
NcanP55066 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NcanP55066 Gmppb-201ENSMUST00000047947 1429 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NcanP55066 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NcanP55066 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NcanP55066 Rnf44-201ENSMUST00000037422 3734 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NcanP55066 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC14.25□□□□□ -0.13
NcanP55066 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC14.25□□□□□ -0.13
NcanP55066 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NcanP55066 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NcanP55066 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
NcanP55066 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NcanP55066 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NcanP55066 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC14.25□□□□□ -0.13
NcanP55066 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NcanP55066 Gm16172-201ENSMUST00000156224 682 ntTSL 3 BASIC14.25□□□□□ -0.13
NcanP55066 Cmtm1-201ENSMUST00000159039 1130 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
NcanP55066 Cyb561-206ENSMUST00000184086 1130 ntTSL 5 BASIC14.25□□□□□ -0.13
NcanP55066 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
NcanP55066 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC14.25□□□□□ -0.13
NcanP55066 Gm18393-201ENSMUST00000208349 1131 ntBASIC14.25□□□□□ -0.13
NcanP55066 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC14.25□□□□□ -0.13
NcanP55066 Kcnk7-201ENSMUST00000052448 1226 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NcanP55066 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
NcanP55066 Ccdc153-201ENSMUST00000092426 1087 ntAPPRIS P2 TSL 2 BASIC14.25□□□□□ -0.13
NcanP55066 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
NcanP55066 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
NcanP55066 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
NcanP55066 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
NcanP55066 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
NcanP55066 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
NcanP55066 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
NcanP55066 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
NcanP55066 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 35.6 ms