Protein–RNA interactions for Protein: P47708

Rph3a, Rabphilin-3A, mousemouse

Predictions only

Length 681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rph3aP47708 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Rph3aP47708 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rph3aP47708 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rph3aP47708 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rph3aP47708 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rph3aP47708 Vapb-201ENSMUST00000067530 7029 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rph3aP47708 Mir698-201ENSMUST00000102164 109 ntBASIC13.22□□□□□ -0.29
Rph3aP47708 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC13.22□□□□□ -0.29
Rph3aP47708 H2-Bl-209ENSMUST00000194244 862 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rph3aP47708 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rph3aP47708 Gm20949-201ENSMUST00000206478 952 ntBASIC13.22□□□□□ -0.29
Rph3aP47708 AC166997.1-201ENSMUST00000225122 572 ntBASIC13.22□□□□□ -0.29
Rph3aP47708 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rph3aP47708 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Rph3aP47708 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC13.22□□□□□ -0.29
Rph3aP47708 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rph3aP47708 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Rph3aP47708 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Rph3aP47708 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC13.22□□□□□ -0.29
Rph3aP47708 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rph3aP47708 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rph3aP47708 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Rph3aP47708 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rph3aP47708 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rph3aP47708 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC13.21□□□□□ -0.29
Rph3aP47708 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
Rph3aP47708 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rph3aP47708 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Rph3aP47708 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Rph3aP47708 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rph3aP47708 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rph3aP47708 Gm15487-201ENSMUST00000122373 465 ntBASIC13.21□□□□□ -0.29
Rph3aP47708 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC13.21□□□□□ -0.29
Rph3aP47708 Pam16-201ENSMUST00000014445 596 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rph3aP47708 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC13.21□□□□□ -0.29
Rph3aP47708 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Rph3aP47708 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rph3aP47708 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC13.21□□□□□ -0.29
Rph3aP47708 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC13.21□□□□□ -0.29
Rph3aP47708 AC154846.1-201ENSMUST00000226278 862 ntBASIC13.21□□□□□ -0.29
Rph3aP47708 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC13.21□□□□□ -0.29
Rph3aP47708 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rph3aP47708 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rph3aP47708 Mir497b-201ENSMUST00000093601 125 ntBASIC13.21□□□□□ -0.29
Rph3aP47708 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Rph3aP47708 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rph3aP47708 Zbtb20-205ENSMUST00000114695 2977 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rph3aP47708 Sned1-201ENSMUST00000062202 9147 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rph3aP47708 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rph3aP47708 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC13.21□□□□□ -0.3
Rph3aP47708 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rph3aP47708 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rph3aP47708 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rph3aP47708 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rph3aP47708 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC13.21□□□□□ -0.3
Rph3aP47708 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rph3aP47708 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rph3aP47708 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC13.21□□□□□ -0.3
Rph3aP47708 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Rph3aP47708 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Rph3aP47708 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rph3aP47708 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rph3aP47708 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rph3aP47708 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Rph3aP47708 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rph3aP47708 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rph3aP47708 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rph3aP47708 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Rph3aP47708 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rph3aP47708 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rph3aP47708 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC13.2□□□□□ -0.3
Rph3aP47708 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC13.2□□□□□ -0.3
Rph3aP47708 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC13.2□□□□□ -0.3
Rph3aP47708 Abcg8-202ENSMUST00000170725 2415 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rph3aP47708 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rph3aP47708 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rph3aP47708 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Rph3aP47708 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC13.2□□□□□ -0.3
Rph3aP47708 Slc25a45-202ENSMUST00000125114 2599 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rph3aP47708 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rph3aP47708 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rph3aP47708 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rph3aP47708 Gm6912-201ENSMUST00000117218 544 ntBASIC13.2□□□□□ -0.3
Rph3aP47708 Gm11557-201ENSMUST00000120200 1008 ntBASIC13.2□□□□□ -0.3
Rph3aP47708 Gm14057-201ENSMUST00000120631 482 ntBASIC13.2□□□□□ -0.3
Rph3aP47708 Gm13385-201ENSMUST00000121089 220 ntBASIC13.2□□□□□ -0.3
Rph3aP47708 Auts2-212ENSMUST00000178555 309 ntBASIC13.2□□□□□ -0.3
Rph3aP47708 Gm8927-201ENSMUST00000181978 981 ntBASIC13.2□□□□□ -0.3
Rph3aP47708 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rph3aP47708 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rph3aP47708 Gm3222-201ENSMUST00000071282 990 ntBASIC13.2□□□□□ -0.3
Rph3aP47708 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rph3aP47708 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rph3aP47708 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rph3aP47708 Tdg-208ENSMUST00000151390 3502 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rph3aP47708 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rph3aP47708 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC13.2□□□□□ -0.3
Rph3aP47708 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rph3aP47708 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.2□□□□□ -0.3
Rph3aP47708 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms