Protein–RNA interactions for Protein: P28862

Mmp3, Stromelysin-1, mousemouse

Predictions only

Length 477 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mmp3P28862 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC14.59□□□□□ -0.07
Mmp3P28862 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC14.59□□□□□ -0.07
Mmp3P28862 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
Mmp3P28862 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Mmp3P28862 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.07
Mmp3P28862 2010300F17Rik-202ENSMUST00000181758 2493 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
Mmp3P28862 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
Mmp3P28862 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Mmp3P28862 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Mmp3P28862 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC14.58□□□□□ -0.08
Mmp3P28862 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Mmp3P28862 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Mmp3P28862 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
Mmp3P28862 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Mmp3P28862 Trav4d-2-201ENSMUST00000120914 335 ntBASIC14.58□□□□□ -0.08
Mmp3P28862 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Mmp3P28862 Gm43818-201ENSMUST00000200605 466 ntBASIC14.58□□□□□ -0.08
Mmp3P28862 Gm29705-201ENSMUST00000212598 474 ntBASIC14.58□□□□□ -0.08
Mmp3P28862 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Mmp3P28862 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Mmp3P28862 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Mmp3P28862 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Mmp3P28862 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Mmp3P28862 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Mmp3P28862 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Mmp3P28862 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
Mmp3P28862 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Mmp3P28862 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Mmp3P28862 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC14.58□□□□□ -0.08
Mmp3P28862 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC14.58□□□□□ -0.08
Mmp3P28862 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Mmp3P28862 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
Mmp3P28862 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC14.58□□□□□ -0.08
Mmp3P28862 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
Mmp3P28862 Gm7553-201ENSMUST00000185805 1426 ntBASIC14.58□□□□□ -0.08
Mmp3P28862 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
Mmp3P28862 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC14.57□□□□□ -0.08
Mmp3P28862 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Mmp3P28862 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Mmp3P28862 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Mmp3P28862 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Mmp3P28862 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Mmp3P28862 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Mmp3P28862 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Mmp3P28862 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Mmp3P28862 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Mmp3P28862 Gm11400-201ENSMUST00000120853 1214 ntBASIC14.57□□□□□ -0.08
Mmp3P28862 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Mmp3P28862 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC14.57□□□□□ -0.08
Mmp3P28862 Gm6007-201ENSMUST00000208170 823 ntBASIC14.57□□□□□ -0.08
Mmp3P28862 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC14.57□□□□□ -0.08
Mmp3P28862 AC126253.1-201ENSMUST00000227974 824 ntBASIC14.57□□□□□ -0.08
Mmp3P28862 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Mmp3P28862 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC14.57□□□□□ -0.08
Mmp3P28862 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Mmp3P28862 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Mmp3P28862 Twsg1-201ENSMUST00000024906 4046 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Mmp3P28862 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Mmp3P28862 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC14.57□□□□□ -0.08
Mmp3P28862 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
Mmp3P28862 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Mmp3P28862 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Mmp3P28862 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
Mmp3P28862 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Mmp3P28862 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
Mmp3P28862 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Mmp3P28862 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
Mmp3P28862 Slc6a4-202ENSMUST00000108402 2796 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Mmp3P28862 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Mmp3P28862 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Mmp3P28862 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Mmp3P28862 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Mmp3P28862 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Mmp3P28862 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC14.56□□□□□ -0.08
Mmp3P28862 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Mmp3P28862 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Mmp3P28862 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Mmp3P28862 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Mmp3P28862 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC14.56□□□□□ -0.08
Mmp3P28862 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Mmp3P28862 Ctu2-201ENSMUST00000116412 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Mmp3P28862 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Mmp3P28862 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Mmp3P28862 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC14.56□□□□□ -0.08
Mmp3P28862 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Mmp3P28862 Gm12384-201ENSMUST00000119228 919 ntBASIC14.56□□□□□ -0.08
Mmp3P28862 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Mmp3P28862 Gm16282-201ENSMUST00000162641 451 ntTSL 3 BASIC14.56□□□□□ -0.08
Mmp3P28862 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
Mmp3P28862 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Mmp3P28862 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Mmp3P28862 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC14.56□□□□□ -0.08
Mmp3P28862 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Mmp3P28862 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Mmp3P28862 Gm11563-201ENSMUST00000092695 1012 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
Mmp3P28862 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Mmp3P28862 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Mmp3P28862 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
Mmp3P28862 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Mmp3P28862 Dctn4-202ENSMUST00000223590 1530 ntBASIC14.56□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms