Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC13.43□□□□□ -0.26
Hoxa4P06798 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC13.43□□□□□ -0.26
Hoxa4P06798 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC13.43□□□□□ -0.26
Hoxa4P06798 Gm42829-201ENSMUST00000198417 2585 ntBASIC13.43□□□□□ -0.26
Hoxa4P06798 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hoxa4P06798 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
Hoxa4P06798 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC13.43□□□□□ -0.26
Hoxa4P06798 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Hoxa4P06798 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Hoxa4P06798 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hoxa4P06798 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hoxa4P06798 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hoxa4P06798 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hoxa4P06798 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hoxa4P06798 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hoxa4P06798 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC13.43□□□□□ -0.26
Hoxa4P06798 Gm10327-201ENSMUST00000105222 1002 ntBASIC13.43□□□□□ -0.26
Hoxa4P06798 Arid3a-202ENSMUST00000105376 4892 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hoxa4P06798 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Hoxa4P06798 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hoxa4P06798 Gm11918-201ENSMUST00000121660 179 ntBASIC13.43□□□□□ -0.26
Hoxa4P06798 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hoxa4P06798 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC13.43□□□□□ -0.26
Hoxa4P06798 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Hoxa4P06798 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hoxa4P06798 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hoxa4P06798 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC13.43□□□□□ -0.26
Hoxa4P06798 Gm8463-201ENSMUST00000208573 613 ntBASIC13.43□□□□□ -0.26
Hoxa4P06798 Gm5186-201ENSMUST00000218781 920 ntBASIC13.43□□□□□ -0.26
Hoxa4P06798 AC159006.1-201ENSMUST00000226396 258 ntBASIC13.43□□□□□ -0.26
Hoxa4P06798 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hoxa4P06798 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hoxa4P06798 Csrnp1-201ENSMUST00000035101 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hoxa4P06798 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hoxa4P06798 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hoxa4P06798 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Hoxa4P06798 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Hoxa4P06798 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hoxa4P06798 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hoxa4P06798 Spopl-203ENSMUST00000132484 6595 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
Hoxa4P06798 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hoxa4P06798 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hoxa4P06798 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hoxa4P06798 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Hoxa4P06798 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hoxa4P06798 Tcirg1-201ENSMUST00000001801 2688 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hoxa4P06798 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hoxa4P06798 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hoxa4P06798 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hoxa4P06798 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
Hoxa4P06798 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
Hoxa4P06798 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hoxa4P06798 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Hoxa4P06798 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Hoxa4P06798 Maged2-204ENSMUST00000112700 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hoxa4P06798 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC13.42□□□□□ -0.26
Hoxa4P06798 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC13.42□□□□□ -0.26
Hoxa4P06798 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC13.42□□□□□ -0.26
Hoxa4P06798 Dlk1-202ENSMUST00000109841 879 ntTSL 5 BASIC13.42□□□□□ -0.26
Hoxa4P06798 Gm5687-201ENSMUST00000118252 640 ntBASIC13.42□□□□□ -0.26
Hoxa4P06798 Rab40c-203ENSMUST00000164982 789 ntTSL 5 BASIC13.42□□□□□ -0.26
Hoxa4P06798 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC13.42□□□□□ -0.26
Hoxa4P06798 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Hoxa4P06798 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC13.42□□□□□ -0.26
Hoxa4P06798 AC073947.2-201ENSMUST00000215888 1130 ntBASIC13.42□□□□□ -0.26
Hoxa4P06798 AC154595.3-201ENSMUST00000224579 384 ntBASIC13.42□□□□□ -0.26
Hoxa4P06798 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hoxa4P06798 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hoxa4P06798 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC13.42□□□□□ -0.26
Hoxa4P06798 Gm9755-201ENSMUST00000032981 1356 ntBASIC13.42□□□□□ -0.26
Hoxa4P06798 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
Hoxa4P06798 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC13.42□□□□□ -0.26
Hoxa4P06798 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
Hoxa4P06798 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Hoxa4P06798 AC153366.2-201ENSMUST00000219461 1984 ntBASIC13.41□□□□□ -0.26
Hoxa4P06798 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hoxa4P06798 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hoxa4P06798 Ap5z1-202ENSMUST00000196055 2965 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hoxa4P06798 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hoxa4P06798 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC13.41□□□□□ -0.26
Hoxa4P06798 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Hoxa4P06798 AC166491.1-201ENSMUST00000227053 2308 ntBASIC13.41□□□□□ -0.26
Hoxa4P06798 Rad54l2-201ENSMUST00000046502 9305 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hoxa4P06798 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hoxa4P06798 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hoxa4P06798 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hoxa4P06798 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Hoxa4P06798 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC13.41□□□□□ -0.26
Hoxa4P06798 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Hoxa4P06798 Gm9002-201ENSMUST00000178437 499 ntBASIC13.41□□□□□ -0.26
Hoxa4P06798 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC13.41□□□□□ -0.26
Hoxa4P06798 AC140375.2-201ENSMUST00000225283 584 ntBASIC13.41□□□□□ -0.26
Hoxa4P06798 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hoxa4P06798 Ppp1r14d-201ENSMUST00000076084 787 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hoxa4P06798 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
Hoxa4P06798 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Hoxa4P06798 Litaf-201ENSMUST00000023143 2235 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hoxa4P06798 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hoxa4P06798 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Hoxa4P06798 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 42.5 ms