Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Col4a1P02463 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Col4a1P02463 Nup93-201ENSMUST00000079961 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Col4a1P02463 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
Col4a1P02463 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Col4a1P02463 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Col4a1P02463 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
Col4a1P02463 Usp18-201ENSMUST00000032198 1771 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Col4a1P02463 Chrm3-202ENSMUST00000187510 4336 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Col4a1P02463 Tmem151b-201ENSMUST00000180252 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Col4a1P02463 AC159649.2-201ENSMUST00000222984 3223 ntBASIC16.47■□□□□ 0.23
Col4a1P02463 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
Col4a1P02463 Ube2k-201ENSMUST00000142407 4893 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Col4a1P02463 Rhbdl2-202ENSMUST00000106204 1120 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Col4a1P02463 Med9os-203ENSMUST00000146334 527 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Col4a1P02463 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Col4a1P02463 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Col4a1P02463 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Col4a1P02463 Gm44172-201ENSMUST00000203903 1235 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Col4a1P02463 Gm45186-201ENSMUST00000206874 478 ntBASIC16.46■□□□□ 0.23
Col4a1P02463 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC16.46■□□□□ 0.23
Col4a1P02463 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC16.46■□□□□ 0.23
Col4a1P02463 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Col4a1P02463 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.23
Col4a1P02463 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC16.46■□□□□ 0.23
Col4a1P02463 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Col4a1P02463 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Col4a1P02463 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Col4a1P02463 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC16.46■□□□□ 0.23
Col4a1P02463 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Col4a1P02463 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Col4a1P02463 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Col4a1P02463 Gm7993-201ENSMUST00000200970 1384 ntBASIC16.46■□□□□ 0.23
Col4a1P02463 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Col4a1P02463 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Col4a1P02463 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Col4a1P02463 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Col4a1P02463 Akt1-205ENSMUST00000128300 1342 ntTSL 5 BASIC16.46■□□□□ 0.23
Col4a1P02463 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
Col4a1P02463 Sorbs3-204ENSMUST00000227929 2460 ntBASIC16.46■□□□□ 0.23
Col4a1P02463 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC16.46■□□□□ 0.23
Col4a1P02463 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Col4a1P02463 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Col4a1P02463 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
Col4a1P02463 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Col4a1P02463 Gm37489-201ENSMUST00000191883 159 ntBASIC16.46■□□□□ 0.23
Col4a1P02463 Gm18584-201ENSMUST00000203098 964 ntBASIC16.46■□□□□ 0.23
Col4a1P02463 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC16.46■□□□□ 0.23
Col4a1P02463 Gm6458-201ENSMUST00000211573 635 ntBASIC16.46■□□□□ 0.23
Col4a1P02463 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Col4a1P02463 Tmem50a-201ENSMUST00000030626 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Col4a1P02463 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Col4a1P02463 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC16.46■□□□□ 0.23
Col4a1P02463 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
Col4a1P02463 Gm5639-201ENSMUST00000122305 2403 ntBASIC16.46■□□□□ 0.23
Col4a1P02463 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
Col4a1P02463 Gm37133-201ENSMUST00000192705 1922 ntBASIC16.46■□□□□ 0.22
Col4a1P02463 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Col4a1P02463 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC16.46■□□□□ 0.22
Col4a1P02463 Gdf3-201ENSMUST00000032211 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Col4a1P02463 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC16.46■□□□□ 0.22
Col4a1P02463 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col4a1P02463 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Col4a1P02463 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Col4a1P02463 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col4a1P02463 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Col4a1P02463 Prox1-201ENSMUST00000010319 3285 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col4a1P02463 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col4a1P02463 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Col4a1P02463 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC16.45■□□□□ 0.22
Col4a1P02463 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Col4a1P02463 Gm43134-201ENSMUST00000199434 1886 ntBASIC16.45■□□□□ 0.22
Col4a1P02463 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col4a1P02463 Gm13875-201ENSMUST00000120162 282 ntBASIC16.45■□□□□ 0.22
Col4a1P02463 Bcas1os1-201ENSMUST00000133586 1239 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Col4a1P02463 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Col4a1P02463 Igdcc4-203ENSMUST00000166273 778 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Col4a1P02463 Mospd4-201ENSMUST00000180618 576 ntBASIC16.45■□□□□ 0.22
Col4a1P02463 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC16.45■□□□□ 0.22
Col4a1P02463 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Col4a1P02463 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC16.45■□□□□ 0.22
Col4a1P02463 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Col4a1P02463 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col4a1P02463 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col4a1P02463 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col4a1P02463 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col4a1P02463 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col4a1P02463 Pdlim5-206ENSMUST00000195975 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col4a1P02463 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col4a1P02463 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC16.45■□□□□ 0.22
Col4a1P02463 Tomt-202ENSMUST00000106970 1354 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col4a1P02463 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col4a1P02463 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Col4a1P02463 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Col4a1P02463 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col4a1P02463 Usf1-207ENSMUST00000160486 1878 ntTSL 2 BASIC16.44■□□□□ 0.22
Col4a1P02463 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Col4a1P02463 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col4a1P02463 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Col4a1P02463 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms