Protein–RNA interactions for Protein: O88384

Vti1b, Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1bO88384 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC13.07□□□□□ -0.32
Vti1bO88384 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vti1bO88384 Slc19a2-201ENSMUST00000044021 3571 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vti1bO88384 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC13.07□□□□□ -0.32
Vti1bO88384 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vti1bO88384 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vti1bO88384 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Vti1bO88384 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vti1bO88384 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC13.07□□□□□ -0.32
Vti1bO88384 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
Vti1bO88384 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Vti1bO88384 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC13.06□□□□□ -0.32
Vti1bO88384 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vti1bO88384 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vti1bO88384 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Vti1bO88384 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Vti1bO88384 Stau2-215ENSMUST00000162435 2735 ntTSL 5 BASIC13.06□□□□□ -0.32
Vti1bO88384 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vti1bO88384 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vti1bO88384 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vti1bO88384 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Vti1bO88384 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC13.06□□□□□ -0.32
Vti1bO88384 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Vti1bO88384 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vti1bO88384 Gm6222-201ENSMUST00000120787 396 ntBASIC13.06□□□□□ -0.32
Vti1bO88384 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC13.06□□□□□ -0.32
Vti1bO88384 Gm27430-201ENSMUST00000184585 107 ntBASIC13.06□□□□□ -0.32
Vti1bO88384 Gm44333-201ENSMUST00000197168 107 ntBASIC13.06□□□□□ -0.32
Vti1bO88384 Rps27l-201ENSMUST00000040917 499 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vti1bO88384 Wnt9b-201ENSMUST00000018630 4518 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vti1bO88384 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vti1bO88384 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vti1bO88384 Cul9-201ENSMUST00000066026 7818 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Vti1bO88384 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vti1bO88384 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vti1bO88384 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vti1bO88384 Adam11-202ENSMUST00000103081 4620 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vti1bO88384 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vti1bO88384 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vti1bO88384 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Vti1bO88384 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Vti1bO88384 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vti1bO88384 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vti1bO88384 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Vti1bO88384 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vti1bO88384 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Vti1bO88384 Siglecf-203ENSMUST00000122423 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vti1bO88384 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vti1bO88384 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vti1bO88384 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vti1bO88384 Rpl37rt-201ENSMUST00000100847 682 ntTSL 3 BASIC13.05□□□□□ -0.32
Vti1bO88384 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Vti1bO88384 Gm12882-201ENSMUST00000121696 517 ntBASIC13.05□□□□□ -0.32
Vti1bO88384 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC13.05□□□□□ -0.32
Vti1bO88384 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Vti1bO88384 Gm9719-201ENSMUST00000162765 543 ntBASIC13.05□□□□□ -0.32
Vti1bO88384 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC13.05□□□□□ -0.32
Vti1bO88384 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Vti1bO88384 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Vti1bO88384 AC124732.2-201ENSMUST00000221977 316 ntBASIC13.05□□□□□ -0.32
Vti1bO88384 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Vti1bO88384 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Vti1bO88384 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Vti1bO88384 Ncan-201ENSMUST00000002412 7195 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vti1bO88384 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vti1bO88384 Ctbs-202ENSMUST00000061937 2892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vti1bO88384 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vti1bO88384 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vti1bO88384 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC13.05□□□□□ -0.32
Vti1bO88384 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Vti1bO88384 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vti1bO88384 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Vti1bO88384 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vti1bO88384 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Vti1bO88384 Fam110b-209ENSMUST00000171403 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vti1bO88384 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vti1bO88384 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vti1bO88384 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Vti1bO88384 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Vti1bO88384 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vti1bO88384 Wrap53-201ENSMUST00000048139 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vti1bO88384 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vti1bO88384 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vti1bO88384 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vti1bO88384 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vti1bO88384 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vti1bO88384 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Vti1bO88384 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC13.04□□□□□ -0.32
Vti1bO88384 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC13.04□□□□□ -0.32
Vti1bO88384 Gm27631-201ENSMUST00000184163 466 ntBASIC13.04□□□□□ -0.32
Vti1bO88384 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC13.04□□□□□ -0.32
Vti1bO88384 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vti1bO88384 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vti1bO88384 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Vti1bO88384 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Vti1bO88384 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vti1bO88384 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vti1bO88384 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Vti1bO88384 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Vti1bO88384 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 48.2 ms