Protein–RNA interactions for Protein: O43868

SLC28A2, Sodium/nucleoside cotransporter 2, humanhuman

Predictions only

Length 658 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A2O43868 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SLC28A2O43868 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SLC28A2O43868 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SLC28A2O43868 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.12■□□□□ 0.17
SLC28A2O43868 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.12■□□□□ 0.17
SLC28A2O43868 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.12■□□□□ 0.17
SLC28A2O43868 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC16.12■□□□□ 0.17
SLC28A2O43868 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.12■□□□□ 0.17
SLC28A2O43868 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.11■□□□□ 0.17
SLC28A2O43868 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC16.11■□□□□ 0.17
SLC28A2O43868 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC16.11■□□□□ 0.17
SLC28A2O43868 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC28A2O43868 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC16.11■□□□□ 0.17
SLC28A2O43868 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC16.11■□□□□ 0.17
SLC28A2O43868 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC28A2O43868 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
SLC28A2O43868 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC28A2O43868 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SLC28A2O43868 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC28A2O43868 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC28A2O43868 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.11■□□□□ 0.17
SLC28A2O43868 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.11■□□□□ 0.17
SLC28A2O43868 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC28A2O43868 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.11■□□□□ 0.17
SLC28A2O43868 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC28A2O43868 AC003669.1-201ENST00000334569 611 ntBASIC16.11■□□□□ 0.17
SLC28A2O43868 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.11■□□□□ 0.17
SLC28A2O43868 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC16.11■□□□□ 0.17
SLC28A2O43868 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC28A2O43868 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC16.11■□□□□ 0.17
SLC28A2O43868 AQP6-203ENST00000551733 849 ntTSL 3 BASIC16.11■□□□□ 0.17
SLC28A2O43868 PDPK2P-202ENST00000562415 1191 ntBASIC16.11■□□□□ 0.17
SLC28A2O43868 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SLC28A2O43868 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.11■□□□□ 0.17
SLC28A2O43868 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.11■□□□□ 0.17
SLC28A2O43868 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC16.11■□□□□ 0.17
SLC28A2O43868 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SLC28A2O43868 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.11■□□□□ 0.17
SLC28A2O43868 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SLC28A2O43868 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC16.11■□□□□ 0.17
SLC28A2O43868 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.11■□□□□ 0.17
SLC28A2O43868 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC28A2O43868 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SLC28A2O43868 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC28A2O43868 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.11■□□□□ 0.17
SLC28A2O43868 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC28A2O43868 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC28A2O43868 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SLC28A2O43868 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SLC28A2O43868 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC28A2O43868 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.11■□□□□ 0.17
SLC28A2O43868 AFMID-201ENST00000327898 1700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SLC28A2O43868 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
SLC28A2O43868 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SLC28A2O43868 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.1■□□□□ 0.17
SLC28A2O43868 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC28A2O43868 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SLC28A2O43868 PFKP-202ENST00000381075 2769 ntTSL 2 BASIC16.1■□□□□ 0.17
SLC28A2O43868 LGMN-202ENST00000393218 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC28A2O43868 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SLC28A2O43868 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC28A2O43868 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC28A2O43868 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.1■□□□□ 0.17
SLC28A2O43868 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
SLC28A2O43868 AC236430.1-201ENST00000402231 743 ntBASIC16.1■□□□□ 0.17
SLC28A2O43868 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC16.1■□□□□ 0.17
SLC28A2O43868 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC16.1■□□□□ 0.17
SLC28A2O43868 FXYD1-202ENST00000455515 594 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
SLC28A2O43868 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC16.1■□□□□ 0.17
SLC28A2O43868 AC093520.2-201ENST00000561830 333 ntBASIC16.1■□□□□ 0.17
SLC28A2O43868 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC16.1■□□□□ 0.17
SLC28A2O43868 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SLC28A2O43868 AL359881.2-201ENST00000602973 570 ntBASIC16.1■□□□□ 0.17
SLC28A2O43868 AC073592.5-201ENST00000624854 528 ntBASIC16.1■□□□□ 0.17
SLC28A2O43868 LINC00628-201ENST00000628516 1289 ntBASIC16.1■□□□□ 0.17
SLC28A2O43868 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC16.1■□□□□ 0.17
SLC28A2O43868 AC092068.3-201ENST00000587894 2016 ntBASIC16.1■□□□□ 0.17
SLC28A2O43868 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
SLC28A2O43868 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC28A2O43868 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC28A2O43868 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SLC28A2O43868 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SLC28A2O43868 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SLC28A2O43868 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
SLC28A2O43868 ETV4-205ENST00000545954 1775 ntTSL 2 BASIC16.1■□□□□ 0.17
SLC28A2O43868 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.1■□□□□ 0.17
SLC28A2O43868 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
SLC28A2O43868 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC28A2O43868 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC28A2O43868 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.1■□□□□ 0.17
SLC28A2O43868 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC28A2O43868 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SLC28A2O43868 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
SLC28A2O43868 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC16.09■□□□□ 0.17
SLC28A2O43868 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.09■□□□□ 0.17
SLC28A2O43868 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SLC28A2O43868 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.09■□□□□ 0.17
SLC28A2O43868 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SLC28A2O43868 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC16.09■□□□□ 0.17
SLC28A2O43868 AC004817.3-201ENST00000602957 2129 ntBASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 57.1 ms