Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 F2rl1-201ENSMUST00000022185 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col15a1O35206 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Col15a1O35206 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col15a1O35206 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Col15a1O35206 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Col15a1O35206 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
Col15a1O35206 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Col15a1O35206 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
Col15a1O35206 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC17.32■□□□□ 0.36
Col15a1O35206 Gm13316-201ENSMUST00000140537 691 ntBASIC17.32■□□□□ 0.36
Col15a1O35206 Gm11210-201ENSMUST00000150203 422 ntTSL 3 BASIC17.32■□□□□ 0.36
Col15a1O35206 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Col15a1O35206 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC17.32■□□□□ 0.36
Col15a1O35206 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC17.32■□□□□ 0.36
Col15a1O35206 Gm32025-201ENSMUST00000217960 307 ntBASIC17.32■□□□□ 0.36
Col15a1O35206 Gm9843-201ENSMUST00000052867 504 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Col15a1O35206 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col15a1O35206 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col15a1O35206 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col15a1O35206 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col15a1O35206 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Col15a1O35206 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col15a1O35206 Chodl-203ENSMUST00000114216 1550 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Col15a1O35206 Adcy3-207ENSMUST00000152065 4728 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col15a1O35206 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Col15a1O35206 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC17.32■□□□□ 0.36
Col15a1O35206 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Col15a1O35206 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Col15a1O35206 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Col15a1O35206 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col15a1O35206 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col15a1O35206 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC17.31■□□□□ 0.36
Col15a1O35206 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC17.31■□□□□ 0.36
Col15a1O35206 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Col15a1O35206 Gm20482-202ENSMUST00000174729 825 ntBASIC17.31■□□□□ 0.36
Col15a1O35206 Anapc16-205ENSMUST00000182912 566 ntTSL 2 BASIC17.31■□□□□ 0.36
Col15a1O35206 CT573034.1-201ENSMUST00000222983 313 ntBASIC17.31■□□□□ 0.36
Col15a1O35206 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col15a1O35206 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col15a1O35206 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col15a1O35206 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Col15a1O35206 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col15a1O35206 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
Col15a1O35206 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col15a1O35206 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col15a1O35206 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col15a1O35206 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Col15a1O35206 Cops4-201ENSMUST00000045993 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col15a1O35206 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col15a1O35206 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Col15a1O35206 Gm12997-201ENSMUST00000120207 640 ntBASIC17.3■□□□□ 0.36
Col15a1O35206 Gm11964-201ENSMUST00000120982 444 ntBASIC17.3■□□□□ 0.36
Col15a1O35206 Gm13442-201ENSMUST00000135749 663 ntTSL 3 BASIC17.3■□□□□ 0.36
Col15a1O35206 Lage3-201ENSMUST00000015433 761 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col15a1O35206 Gm37042-201ENSMUST00000193816 581 ntBASIC17.3■□□□□ 0.36
Col15a1O35206 Gm18584-201ENSMUST00000203098 964 ntBASIC17.3■□□□□ 0.36
Col15a1O35206 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Col15a1O35206 Gm5781-201ENSMUST00000219792 443 ntBASIC17.3■□□□□ 0.36
Col15a1O35206 CT025533.2-201ENSMUST00000228715 1248 ntBASIC17.3■□□□□ 0.36
Col15a1O35206 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Col15a1O35206 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Col15a1O35206 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Col15a1O35206 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col15a1O35206 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col15a1O35206 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col15a1O35206 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col15a1O35206 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col15a1O35206 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Col15a1O35206 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col15a1O35206 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC17.29■□□□□ 0.36
Col15a1O35206 Gm26185-201ENSMUST00000157692 266 ntBASIC17.29■□□□□ 0.36
Col15a1O35206 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Col15a1O35206 Gm28085-201ENSMUST00000189281 1137 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Col15a1O35206 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC17.29■□□□□ 0.36
Col15a1O35206 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC17.29■□□□□ 0.36
Col15a1O35206 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col15a1O35206 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col15a1O35206 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col15a1O35206 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col15a1O35206 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC17.29■□□□□ 0.36
Col15a1O35206 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Col15a1O35206 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col15a1O35206 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col15a1O35206 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Col15a1O35206 Zmym3-206ENSMUST00000120107 5882 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Col15a1O35206 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Col15a1O35206 Hipk2-206ENSMUST00000161779 7684 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
Col15a1O35206 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Col15a1O35206 Gm2383-201ENSMUST00000181461 807 ntBASIC17.28■□□□□ 0.36
Col15a1O35206 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC17.28■□□□□ 0.36
Col15a1O35206 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC17.28■□□□□ 0.36
Col15a1O35206 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
Col15a1O35206 1500011B03Rik-201ENSMUST00000061251 579 ntAPPRIS P5 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col15a1O35206 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Col15a1O35206 Cbx3-ps1-201ENSMUST00000091539 545 ntBASIC17.28■□□□□ 0.36
Col15a1O35206 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Col15a1O35206 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC17.28■□□□□ 0.36
Col15a1O35206 4930528D03Rik-203ENSMUST00000225577 1348 ntBASIC17.28■□□□□ 0.36
Col15a1O35206 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Col15a1O35206 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms