Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcf11G3X9Z4 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcf11G3X9Z4 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Pcf11G3X9Z4 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Pcf11G3X9Z4 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcf11G3X9Z4 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcf11G3X9Z4 Gm14752-201ENSMUST00000120719 2075 ntBASIC20.34■□□□□ 0.85
Pcf11G3X9Z4 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcf11G3X9Z4 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
Pcf11G3X9Z4 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC20.34■□□□□ 0.85
Pcf11G3X9Z4 Gm13316-201ENSMUST00000140537 691 ntBASIC20.34■□□□□ 0.85
Pcf11G3X9Z4 Plekhd1os-201ENSMUST00000153297 944 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Pcf11G3X9Z4 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
Pcf11G3X9Z4 Gm44364-201ENSMUST00000198368 141 ntBASIC20.34■□□□□ 0.85
Pcf11G3X9Z4 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC20.34■□□□□ 0.85
Pcf11G3X9Z4 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcf11G3X9Z4 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
Pcf11G3X9Z4 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcf11G3X9Z4 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
Pcf11G3X9Z4 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcf11G3X9Z4 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC20.33■□□□□ 0.85
Pcf11G3X9Z4 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
Pcf11G3X9Z4 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
Pcf11G3X9Z4 Mettl1-201ENSMUST00000006915 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pcf11G3X9Z4 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pcf11G3X9Z4 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pcf11G3X9Z4 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pcf11G3X9Z4 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
Pcf11G3X9Z4 Gm13297-201ENSMUST00000120205 934 ntBASIC20.33■□□□□ 0.84
Pcf11G3X9Z4 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.84
Pcf11G3X9Z4 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC20.33■□□□□ 0.84
Pcf11G3X9Z4 n-R5s77-201ENSMUST00000083757 119 ntBASIC20.33■□□□□ 0.84
Pcf11G3X9Z4 Olfr366-201ENSMUST00000091001 930 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
Pcf11G3X9Z4 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
Pcf11G3X9Z4 Gm43056-201ENSMUST00000197865 2791 ntBASIC20.33■□□□□ 0.84
Pcf11G3X9Z4 Fam169b-201ENSMUST00000098378 2776 ntTSL 5 BASIC20.33■□□□□ 0.84
Pcf11G3X9Z4 Zfp384-202ENSMUST00000054553 2451 ntTSL 5 BASIC20.33■□□□□ 0.84
Pcf11G3X9Z4 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
Pcf11G3X9Z4 Tmtc1-201ENSMUST00000060095 8383 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcf11G3X9Z4 Gm12626-201ENSMUST00000117339 1983 ntBASIC20.32■□□□□ 0.84
Pcf11G3X9Z4 Gm12623-201ENSMUST00000119849 1983 ntBASIC20.32■□□□□ 0.84
Pcf11G3X9Z4 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC20.32■□□□□ 0.84
Pcf11G3X9Z4 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcf11G3X9Z4 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcf11G3X9Z4 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcf11G3X9Z4 Stk33-204ENSMUST00000121748 2295 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Pcf11G3X9Z4 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Pcf11G3X9Z4 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC20.32■□□□□ 0.84
Pcf11G3X9Z4 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Pcf11G3X9Z4 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
Pcf11G3X9Z4 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcf11G3X9Z4 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcf11G3X9Z4 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
Pcf11G3X9Z4 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcf11G3X9Z4 Gm17376-201ENSMUST00000166016 84 ntBASIC20.32■□□□□ 0.84
Pcf11G3X9Z4 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC20.32■□□□□ 0.84
Pcf11G3X9Z4 Gm9176-201ENSMUST00000219955 1120 ntBASIC20.32■□□□□ 0.84
Pcf11G3X9Z4 AC139319.1-201ENSMUST00000223331 690 ntTSL 5 BASIC20.32■□□□□ 0.84
Pcf11G3X9Z4 Med27-201ENSMUST00000028139 1254 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcf11G3X9Z4 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcf11G3X9Z4 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
Pcf11G3X9Z4 Synpo-206ENSMUST00000130360 5159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcf11G3X9Z4 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC20.32■□□□□ 0.84
Pcf11G3X9Z4 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcf11G3X9Z4 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcf11G3X9Z4 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
Pcf11G3X9Z4 Gm15897-201ENSMUST00000117770 1486 ntBASIC20.31■□□□□ 0.84
Pcf11G3X9Z4 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcf11G3X9Z4 2610507I01Rik-201ENSMUST00000154354 1360 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Pcf11G3X9Z4 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
Pcf11G3X9Z4 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcf11G3X9Z4 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC20.31■□□□□ 0.84
Pcf11G3X9Z4 Gm15236-201ENSMUST00000117309 379 ntBASIC20.31■□□□□ 0.84
Pcf11G3X9Z4 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
Pcf11G3X9Z4 1190007I07Rik-205ENSMUST00000185168 469 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
Pcf11G3X9Z4 Gm18584-201ENSMUST00000203098 964 ntBASIC20.31■□□□□ 0.84
Pcf11G3X9Z4 Gm4598-201ENSMUST00000206756 1080 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Pcf11G3X9Z4 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcf11G3X9Z4 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcf11G3X9Z4 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
Pcf11G3X9Z4 Arhgap39-202ENSMUST00000077821 4494 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcf11G3X9Z4 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcf11G3X9Z4 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Pcf11G3X9Z4 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Pcf11G3X9Z4 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Pcf11G3X9Z4 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcf11G3X9Z4 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
Pcf11G3X9Z4 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcf11G3X9Z4 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
Pcf11G3X9Z4 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcf11G3X9Z4 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
Pcf11G3X9Z4 Ebf3-204ENSMUST00000169486 4994 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
Pcf11G3X9Z4 Aoc2-202ENSMUST00000107264 2230 ntTSL 5 BASIC20.3■□□□□ 0.84
Pcf11G3X9Z4 Camk2b-206ENSMUST00000101585 1650 ntTSL 5 BASIC20.3■□□□□ 0.84
Pcf11G3X9Z4 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
Pcf11G3X9Z4 Gm15808-201ENSMUST00000119046 604 ntBASIC20.3■□□□□ 0.84
Pcf11G3X9Z4 Mypopos-201ENSMUST00000124897 560 ntTSL 3 BASIC20.3■□□□□ 0.84
Pcf11G3X9Z4 Gm17077-201ENSMUST00000133179 279 ntTSL 5 BASIC20.3■□□□□ 0.84
Pcf11G3X9Z4 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
Pcf11G3X9Z4 6530403H02Rik-204ENSMUST00000183276 659 ntTSL 3 BASIC20.3■□□□□ 0.84
Retrieved 100 of 76,532 protein–RNA pairs in 28.6 ms