Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh1F7BJK1 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC12.32□□□□□ -0.44
Pcdh1F7BJK1 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh1F7BJK1 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Pcdh1F7BJK1 Gm8116-201ENSMUST00000182917 1201 ntBASIC12.32□□□□□ -0.44
Pcdh1F7BJK1 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh1F7BJK1 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC12.32□□□□□ -0.44
Pcdh1F7BJK1 Gm43073-201ENSMUST00000198200 1189 ntBASIC12.32□□□□□ -0.44
Pcdh1F7BJK1 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC12.32□□□□□ -0.44
Pcdh1F7BJK1 Ndufaf2-202ENSMUST00000223734 556 ntBASIC12.32□□□□□ -0.44
Pcdh1F7BJK1 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC12.32□□□□□ -0.44
Pcdh1F7BJK1 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh1F7BJK1 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh1F7BJK1 Gm7114-201ENSMUST00000190159 1789 ntBASIC12.32□□□□□ -0.44
Pcdh1F7BJK1 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Pcdh1F7BJK1 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh1F7BJK1 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC12.32□□□□□ -0.44
Pcdh1F7BJK1 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC12.32□□□□□ -0.44
Pcdh1F7BJK1 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh1F7BJK1 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh1F7BJK1 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh1F7BJK1 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh1F7BJK1 Mul1-201ENSMUST00000044058 3733 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Pcdh1F7BJK1 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC12.31□□□□□ -0.44
Pcdh1F7BJK1 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh1F7BJK1 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh1F7BJK1 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC12.31□□□□□ -0.44
Pcdh1F7BJK1 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh1F7BJK1 Syt7-205ENSMUST00000224135 1557 ntBASIC12.31□□□□□ -0.44
Pcdh1F7BJK1 AC139350.1-201ENSMUST00000227064 1594 ntBASIC12.31□□□□□ -0.44
Pcdh1F7BJK1 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh1F7BJK1 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh1F7BJK1 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh1F7BJK1 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh1F7BJK1 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh1F7BJK1 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh1F7BJK1 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh1F7BJK1 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC12.31□□□□□ -0.44
Pcdh1F7BJK1 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Pcdh1F7BJK1 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.31□□□□□ -0.44
Pcdh1F7BJK1 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh1F7BJK1 Gm13015-201ENSMUST00000118674 204 ntBASIC12.31□□□□□ -0.44
Pcdh1F7BJK1 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC12.31□□□□□ -0.44
Pcdh1F7BJK1 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC12.31□□□□□ -0.44
Pcdh1F7BJK1 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC12.31□□□□□ -0.44
Pcdh1F7BJK1 Gm5628-201ENSMUST00000222318 1049 ntBASIC12.31□□□□□ -0.44
Pcdh1F7BJK1 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh1F7BJK1 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh1F7BJK1 Timm10b-201ENSMUST00000058333 694 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh1F7BJK1 Mir125a-201ENSMUST00000083545 68 ntBASIC12.31□□□□□ -0.44
Pcdh1F7BJK1 Gm10175-201ENSMUST00000086013 645 ntBASIC12.31□□□□□ -0.44
Pcdh1F7BJK1 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh1F7BJK1 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh1F7BJK1 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh1F7BJK1 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh1F7BJK1 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Pcdh1F7BJK1 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC12.31□□□□□ -0.44
Pcdh1F7BJK1 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh1F7BJK1 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh1F7BJK1 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh1F7BJK1 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh1F7BJK1 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh1F7BJK1 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.31□□□□□ -0.44
Pcdh1F7BJK1 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh1F7BJK1 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Pcdh1F7BJK1 Src-202ENSMUST00000092576 3887 ntTSL 5 BASIC12.31□□□□□ -0.44
Pcdh1F7BJK1 Nrn1-204ENSMUST00000224323 1779 ntBASIC12.3□□□□□ -0.44
Pcdh1F7BJK1 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh1F7BJK1 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh1F7BJK1 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh1F7BJK1 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh1F7BJK1 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Pcdh1F7BJK1 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh1F7BJK1 Larp4b-202ENSMUST00000188211 5610 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh1F7BJK1 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh1F7BJK1 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Pcdh1F7BJK1 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.3□□□□□ -0.44
Pcdh1F7BJK1 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC12.3□□□□□ -0.44
Pcdh1F7BJK1 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh1F7BJK1 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh1F7BJK1 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC12.3□□□□□ -0.44
Pcdh1F7BJK1 Kbtbd6-202ENSMUST00000226192 2984 ntAPPRIS P2 BASIC12.3□□□□□ -0.44
Pcdh1F7BJK1 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh1F7BJK1 Mir497b-201ENSMUST00000093601 125 ntBASIC12.3□□□□□ -0.44
Pcdh1F7BJK1 Gm45667-201ENSMUST00000210380 1316 ntBASIC12.3□□□□□ -0.44
Pcdh1F7BJK1 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh1F7BJK1 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh1F7BJK1 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh1F7BJK1 Ypel3-203ENSMUST00000106357 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh1F7BJK1 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Pcdh1F7BJK1 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh1F7BJK1 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh1F7BJK1 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.3□□□□□ -0.44
Pcdh1F7BJK1 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Pcdh1F7BJK1 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh1F7BJK1 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC12.29□□□□□ -0.44
Pcdh1F7BJK1 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.29□□□□□ -0.44
Pcdh1F7BJK1 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh1F7BJK1 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Pcdh1F7BJK1 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms