Protein–RNA interactions for Protein: Q920F6

Smc1b, Structural maintenance of chromosomes protein 1B, mousemouse

Predictions only

Length 1,248 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smc1bQ920F6 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smc1bQ920F6 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smc1bQ920F6 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Smc1bQ920F6 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smc1bQ920F6 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smc1bQ920F6 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
Smc1bQ920F6 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Smc1bQ920F6 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smc1bQ920F6 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Smc1bQ920F6 Tmprss9-201ENSMUST00000105333 3497 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smc1bQ920F6 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smc1bQ920F6 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC15.81■□□□□ 0.12
Smc1bQ920F6 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC15.81■□□□□ 0.12
Smc1bQ920F6 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smc1bQ920F6 Gm42853-201ENSMUST00000201273 1387 ntBASIC15.81■□□□□ 0.12
Smc1bQ920F6 AC140451.2-201ENSMUST00000228030 664 ntBASIC15.81■□□□□ 0.12
Smc1bQ920F6 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smc1bQ920F6 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
Smc1bQ920F6 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smc1bQ920F6 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smc1bQ920F6 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smc1bQ920F6 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smc1bQ920F6 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smc1bQ920F6 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC15.81■□□□□ 0.12
Smc1bQ920F6 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smc1bQ920F6 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Smc1bQ920F6 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smc1bQ920F6 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
Smc1bQ920F6 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Smc1bQ920F6 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smc1bQ920F6 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smc1bQ920F6 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smc1bQ920F6 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smc1bQ920F6 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smc1bQ920F6 4933417O13Rik-202ENSMUST00000208893 1571 ntTSL 5 BASIC15.8■□□□□ 0.12
Smc1bQ920F6 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smc1bQ920F6 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smc1bQ920F6 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC15.8■□□□□ 0.12
Smc1bQ920F6 Gm5912-201ENSMUST00000122282 1438 ntBASIC15.8■□□□□ 0.12
Smc1bQ920F6 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smc1bQ920F6 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smc1bQ920F6 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC15.8■□□□□ 0.12
Smc1bQ920F6 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smc1bQ920F6 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smc1bQ920F6 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC15.8■□□□□ 0.12
Smc1bQ920F6 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Smc1bQ920F6 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Smc1bQ920F6 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Smc1bQ920F6 Gm17795-201ENSMUST00000214505 757 ntBASIC15.8■□□□□ 0.12
Smc1bQ920F6 AC155258.1-201ENSMUST00000219303 253 ntBASIC15.8■□□□□ 0.12
Smc1bQ920F6 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smc1bQ920F6 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smc1bQ920F6 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smc1bQ920F6 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smc1bQ920F6 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smc1bQ920F6 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Smc1bQ920F6 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Smc1bQ920F6 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC15.8■□□□□ 0.12
Smc1bQ920F6 Chia1-201ENSMUST00000079132 1681 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smc1bQ920F6 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smc1bQ920F6 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smc1bQ920F6 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Smc1bQ920F6 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smc1bQ920F6 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smc1bQ920F6 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smc1bQ920F6 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Smc1bQ920F6 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smc1bQ920F6 Hsd3b3-201ENSMUST00000090743 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smc1bQ920F6 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Smc1bQ920F6 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smc1bQ920F6 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC15.79■□□□□ 0.12
Smc1bQ920F6 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC15.79■□□□□ 0.12
Smc1bQ920F6 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smc1bQ920F6 Gm11661-201ENSMUST00000121761 1327 ntBASIC15.79■□□□□ 0.12
Smc1bQ920F6 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Smc1bQ920F6 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Smc1bQ920F6 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smc1bQ920F6 Gm43179-201ENSMUST00000198797 275 ntBASIC15.79■□□□□ 0.12
Smc1bQ920F6 Efcab10-201ENSMUST00000020878 673 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smc1bQ920F6 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC15.79■□□□□ 0.12
Smc1bQ920F6 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC15.79■□□□□ 0.12
Smc1bQ920F6 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smc1bQ920F6 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smc1bQ920F6 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smc1bQ920F6 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC15.79■□□□□ 0.12
Smc1bQ920F6 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smc1bQ920F6 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smc1bQ920F6 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Smc1bQ920F6 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Smc1bQ920F6 Egln3-201ENSMUST00000039516 2662 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Smc1bQ920F6 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Smc1bQ920F6 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Smc1bQ920F6 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smc1bQ920F6 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smc1bQ920F6 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Smc1bQ920F6 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smc1bQ920F6 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smc1bQ920F6 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smc1bQ920F6 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Smc1bQ920F6 Ntrk2-208ENSMUST00000225583 2719 ntBASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 44.2 ms