Protein–RNA interactions for Protein: Q91Y12

Pcdha8, Protocadherin alpha 8, mousemouse

Predictions only

Length 946 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdha8Q91Y12 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC13.37□□□□□ -0.27
Pcdha8Q91Y12 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdha8Q91Y12 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdha8Q91Y12 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdha8Q91Y12 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdha8Q91Y12 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdha8Q91Y12 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
Pcdha8Q91Y12 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdha8Q91Y12 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdha8Q91Y12 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdha8Q91Y12 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdha8Q91Y12 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdha8Q91Y12 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdha8Q91Y12 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdha8Q91Y12 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdha8Q91Y12 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.37□□□□□ -0.27
Pcdha8Q91Y12 Arnt-201ENSMUST00000015666 2603 ntTSL 5 BASIC13.37□□□□□ -0.27
Pcdha8Q91Y12 Mospd3-202ENSMUST00000111007 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdha8Q91Y12 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC13.37□□□□□ -0.27
Pcdha8Q91Y12 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdha8Q91Y12 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdha8Q91Y12 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
Pcdha8Q91Y12 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdha8Q91Y12 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdha8Q91Y12 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdha8Q91Y12 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdha8Q91Y12 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
Pcdha8Q91Y12 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdha8Q91Y12 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdha8Q91Y12 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdha8Q91Y12 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdha8Q91Y12 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdha8Q91Y12 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Pcdha8Q91Y12 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Pcdha8Q91Y12 AC159196.2-201ENSMUST00000224082 1622 ntBASIC13.36□□□□□ -0.27
Pcdha8Q91Y12 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdha8Q91Y12 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdha8Q91Y12 Sbk1-201ENSMUST00000056028 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdha8Q91Y12 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdha8Q91Y12 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
Pcdha8Q91Y12 Gm37644-201ENSMUST00000192190 2270 ntBASIC13.36□□□□□ -0.27
Pcdha8Q91Y12 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC13.36□□□□□ -0.27
Pcdha8Q91Y12 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
Pcdha8Q91Y12 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdha8Q91Y12 Gm12585-201ENSMUST00000117307 290 ntBASIC13.36□□□□□ -0.27
Pcdha8Q91Y12 Ntpcr-205ENSMUST00000143504 520 ntTSL 5 BASIC13.36□□□□□ -0.27
Pcdha8Q91Y12 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
Pcdha8Q91Y12 Gm4804-201ENSMUST00000182234 999 ntBASIC13.36□□□□□ -0.27
Pcdha8Q91Y12 Gm6283-201ENSMUST00000182369 1000 ntBASIC13.36□□□□□ -0.27
Pcdha8Q91Y12 Gm29585-201ENSMUST00000185270 514 ntTSL 5 BASIC13.36□□□□□ -0.27
Pcdha8Q91Y12 Gm43703-201ENSMUST00000200523 763 ntBASIC13.36□□□□□ -0.27
Pcdha8Q91Y12 Gm44872-201ENSMUST00000207864 420 ntBASIC13.36□□□□□ -0.27
Pcdha8Q91Y12 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC13.36□□□□□ -0.27
Pcdha8Q91Y12 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdha8Q91Y12 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdha8Q91Y12 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdha8Q91Y12 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdha8Q91Y12 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdha8Q91Y12 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdha8Q91Y12 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
Pcdha8Q91Y12 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdha8Q91Y12 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdha8Q91Y12 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC13.36□□□□□ -0.27
Pcdha8Q91Y12 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdha8Q91Y12 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
Pcdha8Q91Y12 Eif1ad-201ENSMUST00000025759 2469 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdha8Q91Y12 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdha8Q91Y12 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdha8Q91Y12 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdha8Q91Y12 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdha8Q91Y12 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdha8Q91Y12 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
Pcdha8Q91Y12 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdha8Q91Y12 Plekha1-202ENSMUST00000075181 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdha8Q91Y12 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdha8Q91Y12 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdha8Q91Y12 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdha8Q91Y12 Hlcs-202ENSMUST00000163193 5371 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdha8Q91Y12 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdha8Q91Y12 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdha8Q91Y12 Gm15920-201ENSMUST00000118998 402 ntBASIC13.35□□□□□ -0.27
Pcdha8Q91Y12 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdha8Q91Y12 Ighv1-51-201ENSMUST00000192903 354 ntBASIC13.35□□□□□ -0.27
Pcdha8Q91Y12 Gm5425-201ENSMUST00000214125 459 ntBASIC13.35□□□□□ -0.27
Pcdha8Q91Y12 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdha8Q91Y12 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC13.35□□□□□ -0.27
Pcdha8Q91Y12 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC13.35□□□□□ -0.27
Pcdha8Q91Y12 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdha8Q91Y12 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdha8Q91Y12 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdha8Q91Y12 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC13.35□□□□□ -0.27
Pcdha8Q91Y12 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdha8Q91Y12 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdha8Q91Y12 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdha8Q91Y12 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Pcdha8Q91Y12 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdha8Q91Y12 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdha8Q91Y12 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC13.34□□□□□ -0.27
Pcdha8Q91Y12 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Pcdha8Q91Y12 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 27.5 ms