Protein–RNA interactions for Protein: Q91Y04

Pcdhb15, Protocadherin beta 15, mousemouse

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb15Q91Y04 Gm44719-201ENSMUST00000206404 149 ntBASIC15.39■□□□□ 0.05
Pcdhb15Q91Y04 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC15.39■□□□□ 0.05
Pcdhb15Q91Y04 Shd-206ENSMUST00000225145 998 ntBASIC15.39■□□□□ 0.05
Pcdhb15Q91Y04 AC225888.1-201ENSMUST00000227184 728 ntBASIC15.39■□□□□ 0.05
Pcdhb15Q91Y04 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC15.39■□□□□ 0.05
Pcdhb15Q91Y04 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb15Q91Y04 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb15Q91Y04 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb15Q91Y04 Gm10176-201ENSMUST00000159707 2264 ntBASIC15.39■□□□□ 0.05
Pcdhb15Q91Y04 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb15Q91Y04 Tesmin-202ENSMUST00000127142 1714 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb15Q91Y04 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb15Q91Y04 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb15Q91Y04 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb15Q91Y04 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb15Q91Y04 Tmem37-201ENSMUST00000056089 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb15Q91Y04 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb15Q91Y04 Il34-204ENSMUST00000150680 1796 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb15Q91Y04 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb15Q91Y04 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Pcdhb15Q91Y04 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb15Q91Y04 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Pcdhb15Q91Y04 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC15.38■□□□□ 0.05
Pcdhb15Q91Y04 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb15Q91Y04 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb15Q91Y04 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb15Q91Y04 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb15Q91Y04 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Pcdhb15Q91Y04 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb15Q91Y04 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb15Q91Y04 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb15Q91Y04 0610006L08Rik-201ENSMUST00000205326 1589 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb15Q91Y04 AC139350.1-201ENSMUST00000227064 1594 ntBASIC15.38■□□□□ 0.05
Pcdhb15Q91Y04 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb15Q91Y04 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb15Q91Y04 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb15Q91Y04 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Pcdhb15Q91Y04 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
Pcdhb15Q91Y04 Gm15460-201ENSMUST00000118147 391 ntBASIC15.38■□□□□ 0.05
Pcdhb15Q91Y04 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC15.38■□□□□ 0.05
Pcdhb15Q91Y04 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb15Q91Y04 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC15.38■□□□□ 0.05
Pcdhb15Q91Y04 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb15Q91Y04 Gm33320-201ENSMUST00000192232 530 ntBASIC15.38■□□□□ 0.05
Pcdhb15Q91Y04 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb15Q91Y04 Cenpp-201ENSMUST00000021818 1144 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb15Q91Y04 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC15.38■□□□□ 0.05
Pcdhb15Q91Y04 Ccdc185-201ENSMUST00000060041 2055 ntAPPRIS P1 BASIC15.38■□□□□ 0.05
Pcdhb15Q91Y04 Gm5939-201ENSMUST00000119613 2874 ntBASIC15.38■□□□□ 0.05
Pcdhb15Q91Y04 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb15Q91Y04 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb15Q91Y04 Col4a1-201ENSMUST00000033898 6615 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb15Q91Y04 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb15Q91Y04 Gm13730-201ENSMUST00000121036 1462 ntBASIC15.38■□□□□ 0.05
Pcdhb15Q91Y04 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC15.38■□□□□ 0.05
Pcdhb15Q91Y04 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb15Q91Y04 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb15Q91Y04 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb15Q91Y04 Zfp334-201ENSMUST00000103084 8205 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb15Q91Y04 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb15Q91Y04 Gm4782-201ENSMUST00000168705 2046 ntBASIC15.38■□□□□ 0.05
Pcdhb15Q91Y04 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.38■□□□□ 0.05
Pcdhb15Q91Y04 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
Pcdhb15Q91Y04 Arf2-201ENSMUST00000057921 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb15Q91Y04 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Pcdhb15Q91Y04 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb15Q91Y04 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC15.37■□□□□ 0.05
Pcdhb15Q91Y04 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb15Q91Y04 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb15Q91Y04 Clcnka-202ENSMUST00000105790 2511 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb15Q91Y04 Hist1h3e-201ENSMUST00000105107 836 ntAPPRIS P1 BASIC15.37■□□□□ 0.05
Pcdhb15Q91Y04 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC15.37■□□□□ 0.05
Pcdhb15Q91Y04 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC15.37■□□□□ 0.05
Pcdhb15Q91Y04 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC15.37■□□□□ 0.05
Pcdhb15Q91Y04 Gm43303-201ENSMUST00000200133 669 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb15Q91Y04 Ssr1-203ENSMUST00000225246 1825 ntBASIC15.37■□□□□ 0.05
Pcdhb15Q91Y04 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC15.37■□□□□ 0.05
Pcdhb15Q91Y04 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb15Q91Y04 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb15Q91Y04 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC15.37■□□□□ 0.05
Pcdhb15Q91Y04 Gm8775-201ENSMUST00000170943 1327 ntBASIC15.37■□□□□ 0.05
Pcdhb15Q91Y04 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb15Q91Y04 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb15Q91Y04 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb15Q91Y04 Fam13b-201ENSMUST00000040506 3343 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Pcdhb15Q91Y04 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb15Q91Y04 Ppp4r3b-202ENSMUST00000102856 2410 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb15Q91Y04 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb15Q91Y04 AC124751.1-201ENSMUST00000222716 1408 ntBASIC15.36■□□□□ 0.05
Pcdhb15Q91Y04 Trpm4-209ENSMUST00000211743 3673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb15Q91Y04 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb15Q91Y04 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb15Q91Y04 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC15.36■□□□□ 0.05
Pcdhb15Q91Y04 Mrgprf-201ENSMUST00000033386 2087 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb15Q91Y04 Rit2-202ENSMUST00000139924 1674 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb15Q91Y04 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Pcdhb15Q91Y04 Kpna4-201ENSMUST00000029353 8819 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Pcdhb15Q91Y04 Gm11557-201ENSMUST00000120200 1008 ntBASIC15.36■□□□□ 0.05
Pcdhb15Q91Y04 Gm11594-201ENSMUST00000122313 162 ntBASIC15.36■□□□□ 0.05
Pcdhb15Q91Y04 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC15.36■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 41.5 ms