Protein–RNA interactions for Protein: Q91XZ6

Pcdhb4, Protocadherin beta 4, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb4Q91XZ6 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb4Q91XZ6 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb4Q91XZ6 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Pcdhb4Q91XZ6 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb4Q91XZ6 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb4Q91XZ6 Gm13517-201ENSMUST00000120782 1495 ntBASIC13.64□□□□□ -0.23
Pcdhb4Q91XZ6 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb4Q91XZ6 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb4Q91XZ6 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb4Q91XZ6 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb4Q91XZ6 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
Pcdhb4Q91XZ6 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC13.64□□□□□ -0.23
Pcdhb4Q91XZ6 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb4Q91XZ6 Gm10605-201ENSMUST00000182342 665 ntTSL 3 BASIC13.64□□□□□ -0.23
Pcdhb4Q91XZ6 Gm7774-201ENSMUST00000200064 533 ntBASIC13.64□□□□□ -0.23
Pcdhb4Q91XZ6 Gm16476-201ENSMUST00000221544 139 ntBASIC13.64□□□□□ -0.23
Pcdhb4Q91XZ6 Nek4-204ENSMUST00000226833 1252 ntAPPRIS ALT2 BASIC13.64□□□□□ -0.23
Pcdhb4Q91XZ6 Alkbh7-201ENSMUST00000002737 917 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb4Q91XZ6 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb4Q91XZ6 Col18a1-201ENSMUST00000072755 5595 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Pcdhb4Q91XZ6 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Pcdhb4Q91XZ6 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Pcdhb4Q91XZ6 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Pcdhb4Q91XZ6 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
Pcdhb4Q91XZ6 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC13.64□□□□□ -0.23
Pcdhb4Q91XZ6 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb4Q91XZ6 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb4Q91XZ6 Zfp341-202ENSMUST00000109702 3162 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Pcdhb4Q91XZ6 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb4Q91XZ6 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC13.64□□□□□ -0.23
Pcdhb4Q91XZ6 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC13.64□□□□□ -0.23
Pcdhb4Q91XZ6 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb4Q91XZ6 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC13.64□□□□□ -0.23
Pcdhb4Q91XZ6 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb4Q91XZ6 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Pcdhb4Q91XZ6 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb4Q91XZ6 Gm20633-201ENSMUST00000176742 2831 ntBASIC13.63□□□□□ -0.23
Pcdhb4Q91XZ6 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Pcdhb4Q91XZ6 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb4Q91XZ6 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Pcdhb4Q91XZ6 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Pcdhb4Q91XZ6 Plk4-203ENSMUST00000203295 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb4Q91XZ6 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb4Q91XZ6 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb4Q91XZ6 AC139054.1-201ENSMUST00000226898 1598 ntBASIC13.63□□□□□ -0.23
Pcdhb4Q91XZ6 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC13.63□□□□□ -0.23
Pcdhb4Q91XZ6 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb4Q91XZ6 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb4Q91XZ6 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb4Q91XZ6 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb4Q91XZ6 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC13.63□□□□□ -0.23
Pcdhb4Q91XZ6 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Pcdhb4Q91XZ6 Zmiz1os1-201ENSMUST00000156682 3469 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb4Q91XZ6 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Pcdhb4Q91XZ6 Gm24543-201ENSMUST00000103867 82 ntBASIC13.63□□□□□ -0.23
Pcdhb4Q91XZ6 Mir449b-201ENSMUST00000104833 80 ntBASIC13.63□□□□□ -0.23
Pcdhb4Q91XZ6 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb4Q91XZ6 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb4Q91XZ6 Gm6415-201ENSMUST00000118488 348 ntBASIC13.63□□□□□ -0.23
Pcdhb4Q91XZ6 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC13.63□□□□□ -0.23
Pcdhb4Q91XZ6 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC13.63□□□□□ -0.23
Pcdhb4Q91XZ6 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb4Q91XZ6 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb4Q91XZ6 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb4Q91XZ6 Ighv1-25-201ENSMUST00000195638 345 ntBASIC13.63□□□□□ -0.23
Pcdhb4Q91XZ6 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb4Q91XZ6 Gm18027-201ENSMUST00000218947 619 ntBASIC13.63□□□□□ -0.23
Pcdhb4Q91XZ6 AC121804.3-201ENSMUST00000223420 295 ntBASIC13.63□□□□□ -0.23
Pcdhb4Q91XZ6 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb4Q91XZ6 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb4Q91XZ6 Nek7-201ENSMUST00000027642 3737 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb4Q91XZ6 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Pcdhb4Q91XZ6 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb4Q91XZ6 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb4Q91XZ6 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Pcdhb4Q91XZ6 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb4Q91XZ6 AC164702.1-201ENSMUST00000220135 2212 ntBASIC13.63□□□□□ -0.23
Pcdhb4Q91XZ6 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb4Q91XZ6 Gm38577-201ENSMUST00000221531 4545 ntBASIC13.63□□□□□ -0.23
Pcdhb4Q91XZ6 Mir17hg-201ENSMUST00000134140 3536 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb4Q91XZ6 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Pcdhb4Q91XZ6 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb4Q91XZ6 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb4Q91XZ6 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb4Q91XZ6 Cpn1-201ENSMUST00000026210 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb4Q91XZ6 Hcrtr1-202ENSMUST00000119423 2439 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Pcdhb4Q91XZ6 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC13.62□□□□□ -0.23
Pcdhb4Q91XZ6 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb4Q91XZ6 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb4Q91XZ6 Rnf4-204ENSMUST00000182047 2944 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb4Q91XZ6 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb4Q91XZ6 Nub1-202ENSMUST00000197407 3546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb4Q91XZ6 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb4Q91XZ6 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Pcdhb4Q91XZ6 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Pcdhb4Q91XZ6 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC13.62□□□□□ -0.23
Pcdhb4Q91XZ6 Gm12428-201ENSMUST00000119844 727 ntBASIC13.62□□□□□ -0.23
Pcdhb4Q91XZ6 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Pcdhb4Q91XZ6 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
Pcdhb4Q91XZ6 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 93.6 ms