Protein–RNA interactions for Protein: Q8VC34

Rpap2, Putative RNA polymerase II subunit B1 CTD phosphatase Rpap2, mousemouse

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpap2Q8VC34 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Rpap2Q8VC34 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC15.03■□□□□ -0
Rpap2Q8VC34 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
Rpap2Q8VC34 Pxylp1-203ENSMUST00000119141 2768 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rpap2Q8VC34 Hmgb3-201ENSMUST00000015361 1544 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rpap2Q8VC34 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC15.02■□□□□ -0
Rpap2Q8VC34 Men1-202ENSMUST00000078137 2738 ntTSL 1 (best) BASIC15.02■□□□□ -0
Rpap2Q8VC34 Camsap2-202ENSMUST00000192001 6329 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Rpap2Q8VC34 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Rpap2Q8VC34 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
Rpap2Q8VC34 Cyp2ab1-205ENSMUST00000182741 1497 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Rpap2Q8VC34 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
Rpap2Q8VC34 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rpap2Q8VC34 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC15.02■□□□□ -0
Rpap2Q8VC34 Dhx29-201ENSMUST00000038574 4682 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rpap2Q8VC34 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Rpap2Q8VC34 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC15.02■□□□□ -0
Rpap2Q8VC34 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rpap2Q8VC34 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rpap2Q8VC34 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC15.02■□□□□ -0
Rpap2Q8VC34 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rpap2Q8VC34 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC15.02■□□□□ -0
Rpap2Q8VC34 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
Rpap2Q8VC34 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rpap2Q8VC34 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC15.02■□□□□ -0
Rpap2Q8VC34 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC15.02■□□□□ -0
Rpap2Q8VC34 Mir6977-201ENSMUST00000184960 64 ntBASIC15.02■□□□□ -0
Rpap2Q8VC34 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC15.02■□□□□ -0
Rpap2Q8VC34 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
Rpap2Q8VC34 Gm24447-201ENSMUST00000083977 338 ntBASIC15.02■□□□□ -0
Rpap2Q8VC34 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rpap2Q8VC34 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Rpap2Q8VC34 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Rpap2Q8VC34 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC15.02□□□□□ -0.01
Rpap2Q8VC34 Snx12-202ENSMUST00000120389 2415 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Rpap2Q8VC34 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Rpap2Q8VC34 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rpap2Q8VC34 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rpap2Q8VC34 Gm30238-201ENSMUST00000195528 2603 ntBASIC15.01□□□□□ -0.01
Rpap2Q8VC34 Cadps2-213ENSMUST00000166458 4598 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Rpap2Q8VC34 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rpap2Q8VC34 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
Rpap2Q8VC34 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rpap2Q8VC34 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rpap2Q8VC34 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
Rpap2Q8VC34 Mutyh-201ENSMUST00000102699 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rpap2Q8VC34 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rpap2Q8VC34 Pcdha1-202ENSMUST00000193839 4925 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rpap2Q8VC34 Gfpt1-202ENSMUST00000113655 1255 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Rpap2Q8VC34 Gm5354-201ENSMUST00000182417 973 ntBASIC15.01□□□□□ -0.01
Rpap2Q8VC34 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC15.01□□□□□ -0.01
Rpap2Q8VC34 Gm19078-201ENSMUST00000206311 727 ntBASIC15.01□□□□□ -0.01
Rpap2Q8VC34 AC154595.3-201ENSMUST00000224579 384 ntBASIC15.01□□□□□ -0.01
Rpap2Q8VC34 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rpap2Q8VC34 Ins1-201ENSMUST00000039652 1016 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rpap2Q8VC34 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rpap2Q8VC34 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rpap2Q8VC34 Edc4-201ENSMUST00000040254 4780 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rpap2Q8VC34 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
Rpap2Q8VC34 Scp2-201ENSMUST00000030340 2640 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rpap2Q8VC34 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rpap2Q8VC34 Gm10710-201ENSMUST00000047876 3971 ntBASIC15.01□□□□□ -0.01
Rpap2Q8VC34 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rpap2Q8VC34 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rpap2Q8VC34 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rpap2Q8VC34 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rpap2Q8VC34 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Rpap2Q8VC34 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rpap2Q8VC34 Ldb3-207ENSMUST00000227819 1499 ntBASIC15.01□□□□□ -0.01
Rpap2Q8VC34 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC15.01□□□□□ -0.01
Rpap2Q8VC34 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rpap2Q8VC34 Matn3-201ENSMUST00000020899 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Rpap2Q8VC34 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rpap2Q8VC34 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Rpap2Q8VC34 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Rpap2Q8VC34 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC15□□□□□ -0.01
Rpap2Q8VC34 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Rpap2Q8VC34 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC15□□□□□ -0.01
Rpap2Q8VC34 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Rpap2Q8VC34 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Rpap2Q8VC34 Syt7-205ENSMUST00000224135 1557 ntBASIC15□□□□□ -0.01
Rpap2Q8VC34 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC15□□□□□ -0.01
Rpap2Q8VC34 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
Rpap2Q8VC34 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC15□□□□□ -0.01
Rpap2Q8VC34 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC15□□□□□ -0.01
Rpap2Q8VC34 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC15□□□□□ -0.01
Rpap2Q8VC34 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC15□□□□□ -0.01
Rpap2Q8VC34 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC15□□□□□ -0.01
Rpap2Q8VC34 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Rpap2Q8VC34 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rpap2Q8VC34 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Rpap2Q8VC34 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Rpap2Q8VC34 Dhx9-202ENSMUST00000186380 4561 ntAPPRIS P2 TSL 2 BASIC15□□□□□ -0.01
Rpap2Q8VC34 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Rpap2Q8VC34 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC15□□□□□ -0.01
Rpap2Q8VC34 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC15□□□□□ -0.01
Rpap2Q8VC34 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC15□□□□□ -0.01
Rpap2Q8VC34 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Rpap2Q8VC34 Mcc-202ENSMUST00000164666 3606 ntTSL 1 (best) BASIC15□□□□□ -0.01
Rpap2Q8VC34 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms