Protein–RNA interactions for Protein: Q8CJ40

Crocc, Rootletin, mousemouse

Predictions only

Length 2,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CroccQ8CJ40 Map3k20-201ENSMUST00000090824 3334 ntAPPRIS P3 TSL 1 (best) BASIC13.1□□□□□ -0.31
CroccQ8CJ40 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
CroccQ8CJ40 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CroccQ8CJ40 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CroccQ8CJ40 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CroccQ8CJ40 Ankrd6-204ENSMUST00000084750 4444 ntAPPRIS P2 TSL 5 BASIC13.1□□□□□ -0.31
CroccQ8CJ40 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
CroccQ8CJ40 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CroccQ8CJ40 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CroccQ8CJ40 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
CroccQ8CJ40 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC13.1□□□□□ -0.31
CroccQ8CJ40 AC158982.1-201ENSMUST00000228377 901 ntBASIC13.1□□□□□ -0.31
CroccQ8CJ40 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
CroccQ8CJ40 Tmed9-203ENSMUST00000224741 1450 ntBASIC13.09□□□□□ -0.31
CroccQ8CJ40 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CroccQ8CJ40 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CroccQ8CJ40 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CroccQ8CJ40 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
CroccQ8CJ40 4930556M19Rik-201ENSMUST00000180604 2468 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CroccQ8CJ40 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CroccQ8CJ40 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC13.09□□□□□ -0.31
CroccQ8CJ40 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CroccQ8CJ40 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CroccQ8CJ40 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CroccQ8CJ40 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CroccQ8CJ40 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CroccQ8CJ40 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CroccQ8CJ40 1700001C02Rik-203ENSMUST00000127815 660 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CroccQ8CJ40 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC13.09□□□□□ -0.31
CroccQ8CJ40 Gm31326-201ENSMUST00000191856 1048 ntBASIC13.09□□□□□ -0.31
CroccQ8CJ40 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC13.09□□□□□ -0.31
CroccQ8CJ40 AC154595.3-201ENSMUST00000224579 384 ntBASIC13.09□□□□□ -0.31
CroccQ8CJ40 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CroccQ8CJ40 Art3-205ENSMUST00000120193 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CroccQ8CJ40 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
CroccQ8CJ40 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CroccQ8CJ40 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC13.09□□□□□ -0.31
CroccQ8CJ40 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC13.09□□□□□ -0.31
CroccQ8CJ40 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CroccQ8CJ40 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CroccQ8CJ40 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CroccQ8CJ40 Clcn4-203ENSMUST00000210061 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CroccQ8CJ40 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
CroccQ8CJ40 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CroccQ8CJ40 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
CroccQ8CJ40 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC13.09□□□□□ -0.31
CroccQ8CJ40 Rps6ka5-201ENSMUST00000043599 4406 ntAPPRIS P2 TSL 1 (best) BASIC13.09□□□□□ -0.31
CroccQ8CJ40 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC13.08□□□□□ -0.31
CroccQ8CJ40 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.31
CroccQ8CJ40 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
CroccQ8CJ40 Gm15678-201ENSMUST00000117573 960 ntBASIC13.08□□□□□ -0.31
CroccQ8CJ40 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
CroccQ8CJ40 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.31
CroccQ8CJ40 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC13.08□□□□□ -0.31
CroccQ8CJ40 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CroccQ8CJ40 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CroccQ8CJ40 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CroccQ8CJ40 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CroccQ8CJ40 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CroccQ8CJ40 Gm37795-201ENSMUST00000194216 2459 ntBASIC13.08□□□□□ -0.32
CroccQ8CJ40 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC13.08□□□□□ -0.32
CroccQ8CJ40 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CroccQ8CJ40 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CroccQ8CJ40 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CroccQ8CJ40 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC13.08□□□□□ -0.32
CroccQ8CJ40 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CroccQ8CJ40 Gm24420-201ENSMUST00000176676 59 ntBASIC13.08□□□□□ -0.32
CroccQ8CJ40 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CroccQ8CJ40 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
CroccQ8CJ40 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CroccQ8CJ40 Lcmt1-204ENSMUST00000206574 1286 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
CroccQ8CJ40 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC13.08□□□□□ -0.32
CroccQ8CJ40 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
CroccQ8CJ40 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CroccQ8CJ40 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CroccQ8CJ40 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CroccQ8CJ40 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC13.08□□□□□ -0.32
CroccQ8CJ40 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
CroccQ8CJ40 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
CroccQ8CJ40 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CroccQ8CJ40 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CroccQ8CJ40 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CroccQ8CJ40 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CroccQ8CJ40 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CroccQ8CJ40 Cpxm2-201ENSMUST00000033149 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CroccQ8CJ40 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CroccQ8CJ40 Gm5124-201ENSMUST00000127554 1970 ntTSL 5 BASIC13.07□□□□□ -0.32
CroccQ8CJ40 Nid1-201ENSMUST00000005532 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CroccQ8CJ40 Dis3l-203ENSMUST00000120760 3661 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CroccQ8CJ40 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CroccQ8CJ40 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CroccQ8CJ40 Gm28760-201ENSMUST00000185995 736 ntBASIC13.07□□□□□ -0.32
CroccQ8CJ40 Gm20445-201ENSMUST00000061905 565 ntBASIC13.07□□□□□ -0.32
CroccQ8CJ40 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CroccQ8CJ40 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC13.07□□□□□ -0.32
CroccQ8CJ40 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CroccQ8CJ40 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC13.07□□□□□ -0.32
CroccQ8CJ40 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
CroccQ8CJ40 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
CroccQ8CJ40 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms