Protein–RNA interactions for Protein: Q8CDV4

Trim52, Tripartite motif-containing 52, mousemouse

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim52Q8CDV4 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim52Q8CDV4 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim52Q8CDV4 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trim52Q8CDV4 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
Trim52Q8CDV4 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Trim52Q8CDV4 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
Trim52Q8CDV4 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC16.79■□□□□ 0.28
Trim52Q8CDV4 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
Trim52Q8CDV4 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trim52Q8CDV4 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trim52Q8CDV4 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trim52Q8CDV4 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trim52Q8CDV4 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Trim52Q8CDV4 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
Trim52Q8CDV4 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim52Q8CDV4 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trim52Q8CDV4 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC16.79■□□□□ 0.28
Trim52Q8CDV4 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
Trim52Q8CDV4 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim52Q8CDV4 4933427G23Rik-202ENSMUST00000126393 544 ntBASIC16.79■□□□□ 0.28
Trim52Q8CDV4 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC16.79■□□□□ 0.28
Trim52Q8CDV4 Gm43118-201ENSMUST00000199149 775 ntBASIC16.79■□□□□ 0.28
Trim52Q8CDV4 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trim52Q8CDV4 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC16.79■□□□□ 0.28
Trim52Q8CDV4 Comt-201ENSMUST00000000335 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim52Q8CDV4 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
Trim52Q8CDV4 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC16.79■□□□□ 0.28
Trim52Q8CDV4 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim52Q8CDV4 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim52Q8CDV4 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim52Q8CDV4 Gpc1-201ENSMUST00000045970 4176 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim52Q8CDV4 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim52Q8CDV4 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim52Q8CDV4 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim52Q8CDV4 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC16.79■□□□□ 0.28
Trim52Q8CDV4 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim52Q8CDV4 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim52Q8CDV4 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
Trim52Q8CDV4 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim52Q8CDV4 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
Trim52Q8CDV4 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC16.79■□□□□ 0.28
Trim52Q8CDV4 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim52Q8CDV4 AC148324.1-201ENSMUST00000219034 4240 ntBASIC16.78■□□□□ 0.28
Trim52Q8CDV4 Gm18222-201ENSMUST00000202416 1387 ntBASIC16.78■□□□□ 0.28
Trim52Q8CDV4 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim52Q8CDV4 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim52Q8CDV4 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim52Q8CDV4 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trim52Q8CDV4 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trim52Q8CDV4 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
Trim52Q8CDV4 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim52Q8CDV4 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Trim52Q8CDV4 Ubr2-201ENSMUST00000113335 5691 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim52Q8CDV4 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim52Q8CDV4 Mir686-201ENSMUST00000102174 109 ntBASIC16.78■□□□□ 0.28
Trim52Q8CDV4 Rps3-202ENSMUST00000107096 952 ntTSL 3 BASIC16.78■□□□□ 0.28
Trim52Q8CDV4 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trim52Q8CDV4 Gm43179-201ENSMUST00000198797 275 ntBASIC16.78■□□□□ 0.28
Trim52Q8CDV4 AC122305.4-201ENSMUST00000216159 1206 ntBASIC16.78■□□□□ 0.28
Trim52Q8CDV4 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim52Q8CDV4 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim52Q8CDV4 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim52Q8CDV4 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
Trim52Q8CDV4 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
Trim52Q8CDV4 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim52Q8CDV4 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim52Q8CDV4 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim52Q8CDV4 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
Trim52Q8CDV4 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
Trim52Q8CDV4 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim52Q8CDV4 Celf5-201ENSMUST00000118763 4391 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim52Q8CDV4 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim52Q8CDV4 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC16.77■□□□□ 0.28
Trim52Q8CDV4 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC16.77■□□□□ 0.28
Trim52Q8CDV4 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Trim52Q8CDV4 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim52Q8CDV4 Gm16202-201ENSMUST00000117532 544 ntBASIC16.77■□□□□ 0.28
Trim52Q8CDV4 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Trim52Q8CDV4 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
Trim52Q8CDV4 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC16.77■□□□□ 0.28
Trim52Q8CDV4 Tspan17-208ENSMUST00000163915 459 ntTSL 5 BASIC16.77■□□□□ 0.28
Trim52Q8CDV4 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC16.77■□□□□ 0.28
Trim52Q8CDV4 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC16.77■□□□□ 0.28
Trim52Q8CDV4 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC16.77■□□□□ 0.28
Trim52Q8CDV4 1700113H08Rik-202ENSMUST00000189456 974 ntTSL 5 BASIC16.77■□□□□ 0.28
Trim52Q8CDV4 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC16.77■□□□□ 0.28
Trim52Q8CDV4 Gm37008-201ENSMUST00000195712 319 ntBASIC16.77■□□□□ 0.28
Trim52Q8CDV4 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Trim52Q8CDV4 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC16.77■□□□□ 0.28
Trim52Q8CDV4 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim52Q8CDV4 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
Trim52Q8CDV4 Evl-203ENSMUST00000109854 1870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trim52Q8CDV4 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
Trim52Q8CDV4 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trim52Q8CDV4 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC16.77■□□□□ 0.27
Trim52Q8CDV4 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trim52Q8CDV4 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trim52Q8CDV4 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Trim52Q8CDV4 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
Trim52Q8CDV4 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 44.9 ms