Protein–RNA interactions for Protein: Q8C460

Eri3, ERI1 exoribonuclease 3, mousemouse

Predictions only

Length 337 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Eri3Q8C460 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Eri3Q8C460 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Eri3Q8C460 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Eri3Q8C460 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Eri3Q8C460 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Eri3Q8C460 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Eri3Q8C460 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Eri3Q8C460 Gm42872-201ENSMUST00000200026 1967 ntBASIC13.02□□□□□ -0.32
Eri3Q8C460 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Eri3Q8C460 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Eri3Q8C460 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC13.02□□□□□ -0.33
Eri3Q8C460 Vps53-204ENSMUST00000129256 650 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Eri3Q8C460 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Eri3Q8C460 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC13.02□□□□□ -0.33
Eri3Q8C460 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC13.02□□□□□ -0.33
Eri3Q8C460 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC13.02□□□□□ -0.33
Eri3Q8C460 Gm28760-201ENSMUST00000185995 736 ntBASIC13.02□□□□□ -0.33
Eri3Q8C460 Gm28539-201ENSMUST00000190050 2982 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Eri3Q8C460 Gm44855-201ENSMUST00000205725 362 ntBASIC13.02□□□□□ -0.33
Eri3Q8C460 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Eri3Q8C460 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Eri3Q8C460 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Eri3Q8C460 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Eri3Q8C460 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC13.02□□□□□ -0.33
Eri3Q8C460 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC13.02□□□□□ -0.33
Eri3Q8C460 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Eri3Q8C460 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Eri3Q8C460 Gm5639-201ENSMUST00000122305 2403 ntBASIC13.02□□□□□ -0.33
Eri3Q8C460 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Eri3Q8C460 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
Eri3Q8C460 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Eri3Q8C460 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Eri3Q8C460 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC13.02□□□□□ -0.33
Eri3Q8C460 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Eri3Q8C460 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Eri3Q8C460 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Eri3Q8C460 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Eri3Q8C460 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Eri3Q8C460 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Eri3Q8C460 Nfyc-201ENSMUST00000043429 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Eri3Q8C460 Gm12626-201ENSMUST00000117339 1983 ntBASIC13.01□□□□□ -0.33
Eri3Q8C460 Gm12623-201ENSMUST00000119849 1983 ntBASIC13.01□□□□□ -0.33
Eri3Q8C460 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Eri3Q8C460 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Eri3Q8C460 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC13.01□□□□□ -0.33
Eri3Q8C460 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Eri3Q8C460 Slc4a1ap-201ENSMUST00000114533 2424 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Eri3Q8C460 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Eri3Q8C460 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Eri3Q8C460 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Eri3Q8C460 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Eri3Q8C460 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC13.01□□□□□ -0.33
Eri3Q8C460 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC13.01□□□□□ -0.33
Eri3Q8C460 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC13.01□□□□□ -0.33
Eri3Q8C460 Prrg2-207ENSMUST00000210500 922 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Eri3Q8C460 Gm7730-201ENSMUST00000212486 454 ntBASIC13.01□□□□□ -0.33
Eri3Q8C460 Gm18934-201ENSMUST00000216671 1044 ntBASIC13.01□□□□□ -0.33
Eri3Q8C460 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Eri3Q8C460 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Eri3Q8C460 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Eri3Q8C460 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Eri3Q8C460 Gm13859-201ENSMUST00000119936 1423 ntBASIC13.01□□□□□ -0.33
Eri3Q8C460 Ints1-201ENSMUST00000072607 7102 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Eri3Q8C460 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Eri3Q8C460 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Eri3Q8C460 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC13.01□□□□□ -0.33
Eri3Q8C460 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Eri3Q8C460 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Eri3Q8C460 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
Eri3Q8C460 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Eri3Q8C460 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC13.01□□□□□ -0.33
Eri3Q8C460 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC13.01□□□□□ -0.33
Eri3Q8C460 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Eri3Q8C460 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Eri3Q8C460 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Eri3Q8C460 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC13.01□□□□□ -0.33
Eri3Q8C460 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Eri3Q8C460 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Eri3Q8C460 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Eri3Q8C460 Lrrc8a-202ENSMUST00000113654 4194 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Eri3Q8C460 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC13□□□□□ -0.33
Eri3Q8C460 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Eri3Q8C460 Ngef-201ENSMUST00000027477 2746 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Eri3Q8C460 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Eri3Q8C460 Gm43399-201ENSMUST00000202546 2374 ntBASIC13□□□□□ -0.33
Eri3Q8C460 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Eri3Q8C460 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Eri3Q8C460 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Eri3Q8C460 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Eri3Q8C460 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Eri3Q8C460 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Eri3Q8C460 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC13□□□□□ -0.33
Eri3Q8C460 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Eri3Q8C460 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Eri3Q8C460 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Eri3Q8C460 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Eri3Q8C460 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Eri3Q8C460 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC13□□□□□ -0.33
Eri3Q8C460 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Eri3Q8C460 Ube2j2-206ENSMUST00000118192 922 ntTSL 5 BASIC13□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 29.6 ms