Protein–RNA interactions for Protein: Q8BGE7

Trim6, Tripartite motif-containing protein 6, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim6Q8BGE7 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC14.55□□□□□ -0.08
Trim6Q8BGE7 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim6Q8BGE7 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim6Q8BGE7 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trim6Q8BGE7 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trim6Q8BGE7 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trim6Q8BGE7 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim6Q8BGE7 Hadhb-203ENSMUST00000114786 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim6Q8BGE7 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
Trim6Q8BGE7 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC14.55□□□□□ -0.08
Trim6Q8BGE7 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC14.55□□□□□ -0.08
Trim6Q8BGE7 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC14.55□□□□□ -0.08
Trim6Q8BGE7 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC14.55□□□□□ -0.08
Trim6Q8BGE7 Gm12260-201ENSMUST00000122447 411 ntBASIC14.55□□□□□ -0.08
Trim6Q8BGE7 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC14.55□□□□□ -0.08
Trim6Q8BGE7 Gm13431-203ENSMUST00000147012 388 ntTSL 2 BASIC14.55□□□□□ -0.08
Trim6Q8BGE7 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC14.55□□□□□ -0.08
Trim6Q8BGE7 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC14.55□□□□□ -0.08
Trim6Q8BGE7 Gm5712-201ENSMUST00000199748 1043 ntBASIC14.55□□□□□ -0.08
Trim6Q8BGE7 Gm42790-201ENSMUST00000201268 969 ntBASIC14.55□□□□□ -0.08
Trim6Q8BGE7 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC14.55□□□□□ -0.08
Trim6Q8BGE7 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim6Q8BGE7 Shank2-203ENSMUST00000105902 8988 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Trim6Q8BGE7 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
Trim6Q8BGE7 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trim6Q8BGE7 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC14.55□□□□□ -0.08
Trim6Q8BGE7 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trim6Q8BGE7 Cldn34c1-201ENSMUST00000113343 3301 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim6Q8BGE7 Rubie-203ENSMUST00000227803 2430 ntBASIC14.55□□□□□ -0.08
Trim6Q8BGE7 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim6Q8BGE7 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Trim6Q8BGE7 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC14.55□□□□□ -0.08
Trim6Q8BGE7 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim6Q8BGE7 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Trim6Q8BGE7 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Trim6Q8BGE7 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Trim6Q8BGE7 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Trim6Q8BGE7 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC14.55□□□□□ -0.08
Trim6Q8BGE7 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim6Q8BGE7 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim6Q8BGE7 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim6Q8BGE7 Gpr107-201ENSMUST00000056433 6134 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim6Q8BGE7 Snap23-202ENSMUST00000110711 2723 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim6Q8BGE7 Ankrd42-202ENSMUST00000118157 2782 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim6Q8BGE7 Kif1c-202ENSMUST00000094499 5168 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim6Q8BGE7 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim6Q8BGE7 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Trim6Q8BGE7 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trim6Q8BGE7 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trim6Q8BGE7 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC14.54□□□□□ -0.08
Trim6Q8BGE7 Ino80dos-204ENSMUST00000188602 678 ntTSL 2 BASIC14.54□□□□□ -0.08
Trim6Q8BGE7 Gm38225-201ENSMUST00000194001 393 ntBASIC14.54□□□□□ -0.08
Trim6Q8BGE7 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Trim6Q8BGE7 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC14.54□□□□□ -0.08
Trim6Q8BGE7 Gm18057-201ENSMUST00000208220 503 ntBASIC14.54□□□□□ -0.08
Trim6Q8BGE7 AC158529.1-201ENSMUST00000223618 239 ntBASIC14.54□□□□□ -0.08
Trim6Q8BGE7 AC090659.1-201ENSMUST00000224334 768 ntBASIC14.54□□□□□ -0.08
Trim6Q8BGE7 AC139350.3-201ENSMUST00000226151 420 ntBASIC14.54□□□□□ -0.08
Trim6Q8BGE7 CT030704.2-201ENSMUST00000228887 494 ntBASIC14.54□□□□□ -0.08
Trim6Q8BGE7 Il17b-201ENSMUST00000025471 692 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim6Q8BGE7 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Trim6Q8BGE7 Gm42466-201ENSMUST00000202099 1301 ntBASIC14.54□□□□□ -0.08
Trim6Q8BGE7 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim6Q8BGE7 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim6Q8BGE7 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim6Q8BGE7 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Trim6Q8BGE7 Ret-201ENSMUST00000032201 5456 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim6Q8BGE7 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Trim6Q8BGE7 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim6Q8BGE7 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Trim6Q8BGE7 Zfp467-206ENSMUST00000114561 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim6Q8BGE7 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Trim6Q8BGE7 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim6Q8BGE7 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim6Q8BGE7 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trim6Q8BGE7 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trim6Q8BGE7 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim6Q8BGE7 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC14.53□□□□□ -0.08
Trim6Q8BGE7 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim6Q8BGE7 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Trim6Q8BGE7 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Trim6Q8BGE7 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim6Q8BGE7 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
Trim6Q8BGE7 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Trim6Q8BGE7 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trim6Q8BGE7 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim6Q8BGE7 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim6Q8BGE7 Dennd6b-201ENSMUST00000078953 4607 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim6Q8BGE7 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim6Q8BGE7 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim6Q8BGE7 Epo-202ENSMUST00000111038 855 ntAPPRIS P3 TSL 5 BASIC14.53□□□□□ -0.08
Trim6Q8BGE7 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim6Q8BGE7 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC14.53□□□□□ -0.08
Trim6Q8BGE7 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Trim6Q8BGE7 AA543401-201ENSMUST00000164248 1269 ntBASIC14.53□□□□□ -0.08
Trim6Q8BGE7 AA619741-201ENSMUST00000195095 646 ntBASIC14.53□□□□□ -0.08
Trim6Q8BGE7 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC14.53□□□□□ -0.08
Trim6Q8BGE7 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Trim6Q8BGE7 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Trim6Q8BGE7 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms