Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Gm26464-201ENSMUST00000157094 305 ntBASIC12.67□□□□□ -0.38
Pif1Q80SX8 Gm27772-201ENSMUST00000184900 187 ntBASIC12.67□□□□□ -0.38
Pif1Q80SX8 Gm45784-201ENSMUST00000188360 142 ntBASIC12.67□□□□□ -0.38
Pif1Q80SX8 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC12.67□□□□□ -0.38
Pif1Q80SX8 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pif1Q80SX8 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pif1Q80SX8 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Pif1Q80SX8 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pif1Q80SX8 Hoxc4-201ENSMUST00000100164 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pif1Q80SX8 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC12.67□□□□□ -0.38
Pif1Q80SX8 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pif1Q80SX8 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC12.67□□□□□ -0.38
Pif1Q80SX8 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Pif1Q80SX8 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Pif1Q80SX8 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pif1Q80SX8 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pif1Q80SX8 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pif1Q80SX8 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pif1Q80SX8 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pif1Q80SX8 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pif1Q80SX8 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pif1Q80SX8 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Pif1Q80SX8 Kif7-203ENSMUST00000183846 4577 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Pif1Q80SX8 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pif1Q80SX8 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pif1Q80SX8 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pif1Q80SX8 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pif1Q80SX8 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pif1Q80SX8 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pif1Q80SX8 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC12.66□□□□□ -0.38
Pif1Q80SX8 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pif1Q80SX8 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Pif1Q80SX8 Col3a1-201ENSMUST00000087883 5564 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pif1Q80SX8 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Pif1Q80SX8 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pif1Q80SX8 Cisd3-201ENSMUST00000107583 737 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pif1Q80SX8 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pif1Q80SX8 Gm13689-201ENSMUST00000119360 685 ntBASIC12.66□□□□□ -0.38
Pif1Q80SX8 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC12.66□□□□□ -0.38
Pif1Q80SX8 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pif1Q80SX8 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pif1Q80SX8 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pif1Q80SX8 2900076G11Rik-201ENSMUST00000202297 631 ntBASIC12.66□□□□□ -0.38
Pif1Q80SX8 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pif1Q80SX8 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pif1Q80SX8 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pif1Q80SX8 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pif1Q80SX8 Lyzl4-201ENSMUST00000077706 996 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pif1Q80SX8 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Pif1Q80SX8 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
Pif1Q80SX8 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC12.66□□□□□ -0.38
Pif1Q80SX8 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pif1Q80SX8 Tmem211-201ENSMUST00000086615 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pif1Q80SX8 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pif1Q80SX8 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pif1Q80SX8 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Pif1Q80SX8 Gm37015-201ENSMUST00000192763 1521 ntBASIC12.66□□□□□ -0.38
Pif1Q80SX8 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pif1Q80SX8 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pif1Q80SX8 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Pif1Q80SX8 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pif1Q80SX8 AC162938.1-201ENSMUST00000213140 2323 ntBASIC12.66□□□□□ -0.38
Pif1Q80SX8 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Pif1Q80SX8 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC12.66□□□□□ -0.38
Pif1Q80SX8 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pif1Q80SX8 Gm42471-201ENSMUST00000201457 1865 ntBASIC12.65□□□□□ -0.38
Pif1Q80SX8 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pif1Q80SX8 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC12.65□□□□□ -0.38
Pif1Q80SX8 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pif1Q80SX8 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pif1Q80SX8 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pif1Q80SX8 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pif1Q80SX8 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pif1Q80SX8 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
Pif1Q80SX8 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pif1Q80SX8 Gm12485-201ENSMUST00000119641 291 ntBASIC12.65□□□□□ -0.38
Pif1Q80SX8 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC12.65□□□□□ -0.38
Pif1Q80SX8 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Pif1Q80SX8 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pif1Q80SX8 Gm27731-201ENSMUST00000185192 107 ntBASIC12.65□□□□□ -0.38
Pif1Q80SX8 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pif1Q80SX8 Gm5276-201ENSMUST00000196683 1047 ntBASIC12.65□□□□□ -0.38
Pif1Q80SX8 Gm7561-201ENSMUST00000211203 886 ntBASIC12.65□□□□□ -0.38
Pif1Q80SX8 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC12.65□□□□□ -0.38
Pif1Q80SX8 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC12.65□□□□□ -0.38
Pif1Q80SX8 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pif1Q80SX8 Sdf4-202ENSMUST00000097734 973 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pif1Q80SX8 6430531B16Rik-201ENSMUST00000097970 1161 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pif1Q80SX8 Gm6091-201ENSMUST00000098307 165 ntBASIC12.65□□□□□ -0.38
Pif1Q80SX8 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pif1Q80SX8 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pif1Q80SX8 AC121805.2-201ENSMUST00000218808 2538 ntBASIC12.65□□□□□ -0.38
Pif1Q80SX8 Ssr1-204ENSMUST00000225319 1610 ntBASIC12.65□□□□□ -0.38
Pif1Q80SX8 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Pif1Q80SX8 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pif1Q80SX8 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pif1Q80SX8 Plxna4os1-201ENSMUST00000150314 1977 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Pif1Q80SX8 Knop1-203ENSMUST00000106549 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Pif1Q80SX8 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Pif1Q80SX8 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 45.9 ms