Protein–RNA interactions for Protein: Q6PD21

Shb, SH2 domain-containing adapter protein B, mousemouse

Predictions only

Length 503 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ShbQ6PD21 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ShbQ6PD21 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ShbQ6PD21 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
ShbQ6PD21 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
ShbQ6PD21 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC14.58□□□□□ -0.07
ShbQ6PD21 Zbtb9-201ENSMUST00000120016 2798 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.07
ShbQ6PD21 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC14.58□□□□□ -0.07
ShbQ6PD21 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.58□□□□□ -0.08
ShbQ6PD21 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.58□□□□□ -0.08
ShbQ6PD21 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ShbQ6PD21 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ShbQ6PD21 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC14.58□□□□□ -0.08
ShbQ6PD21 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC14.58□□□□□ -0.08
ShbQ6PD21 Apoe-208ENSMUST00000174191 472 ntTSL 2 BASIC14.58□□□□□ -0.08
ShbQ6PD21 Gm25700-201ENSMUST00000177693 110 ntBASIC14.58□□□□□ -0.08
ShbQ6PD21 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC14.58□□□□□ -0.08
ShbQ6PD21 3300002P13Rik-201ENSMUST00000204020 1092 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ShbQ6PD21 Zfp36l1-203ENSMUST00000218835 292 ntTSL 3 BASIC14.58□□□□□ -0.08
ShbQ6PD21 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
ShbQ6PD21 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ShbQ6PD21 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ShbQ6PD21 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC14.58□□□□□ -0.08
ShbQ6PD21 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
ShbQ6PD21 Pef1-202ENSMUST00000118199 1915 ntAPPRIS P1 TSL 5 BASIC14.58□□□□□ -0.08
ShbQ6PD21 Cnot11-203ENSMUST00000161515 3482 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
ShbQ6PD21 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC14.58□□□□□ -0.08
ShbQ6PD21 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC14.58□□□□□ -0.08
ShbQ6PD21 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC14.58□□□□□ -0.08
ShbQ6PD21 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ShbQ6PD21 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
ShbQ6PD21 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
ShbQ6PD21 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC14.57□□□□□ -0.08
ShbQ6PD21 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
ShbQ6PD21 Unc13b-201ENSMUST00000079978 6354 ntAPPRIS P2 TSL 5 BASIC14.57□□□□□ -0.08
ShbQ6PD21 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ShbQ6PD21 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ShbQ6PD21 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC14.57□□□□□ -0.08
ShbQ6PD21 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ShbQ6PD21 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ShbQ6PD21 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.57□□□□□ -0.08
ShbQ6PD21 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ShbQ6PD21 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
ShbQ6PD21 Etv6-201ENSMUST00000081028 5545 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
ShbQ6PD21 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC14.57□□□□□ -0.08
ShbQ6PD21 Nmb-202ENSMUST00000119428 678 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
ShbQ6PD21 Gm8566-201ENSMUST00000120174 465 ntBASIC14.57□□□□□ -0.08
ShbQ6PD21 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ShbQ6PD21 Hsbp1l1-201ENSMUST00000166219 1251 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ShbQ6PD21 Gm5597-201ENSMUST00000182353 1193 ntBASIC14.57□□□□□ -0.08
ShbQ6PD21 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
ShbQ6PD21 CT025694.1-201ENSMUST00000226188 934 ntBASIC14.57□□□□□ -0.08
ShbQ6PD21 AC161537.1-201ENSMUST00000226199 1015 ntBASIC14.57□□□□□ -0.08
ShbQ6PD21 Cryab-201ENSMUST00000034562 946 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ShbQ6PD21 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ShbQ6PD21 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ShbQ6PD21 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ShbQ6PD21 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC14.57□□□□□ -0.08
ShbQ6PD21 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ShbQ6PD21 Hnrnpc-211ENSMUST00000228748 1691 ntAPPRIS P5 BASIC14.57□□□□□ -0.08
ShbQ6PD21 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ShbQ6PD21 Xrra1-202ENSMUST00000207855 1334 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
ShbQ6PD21 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ShbQ6PD21 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
ShbQ6PD21 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ShbQ6PD21 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
ShbQ6PD21 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
ShbQ6PD21 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
ShbQ6PD21 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
ShbQ6PD21 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ShbQ6PD21 Aire-202ENSMUST00000105395 1630 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ShbQ6PD21 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
ShbQ6PD21 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ShbQ6PD21 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
ShbQ6PD21 Strap-201ENSMUST00000064910 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ShbQ6PD21 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
ShbQ6PD21 Gm13996-201ENSMUST00000118456 430 ntBASIC14.56□□□□□ -0.08
ShbQ6PD21 Gm13388-201ENSMUST00000126659 425 ntTSL 3 BASIC14.56□□□□□ -0.08
ShbQ6PD21 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC14.56□□□□□ -0.08
ShbQ6PD21 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC14.56□□□□□ -0.08
ShbQ6PD21 Gm5051-201ENSMUST00000204085 485 ntBASIC14.56□□□□□ -0.08
ShbQ6PD21 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ShbQ6PD21 Npepps-215ENSMUST00000167806 2307 ntTSL 5 BASIC14.56□□□□□ -0.08
ShbQ6PD21 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ShbQ6PD21 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
ShbQ6PD21 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
ShbQ6PD21 Wdr45-223ENSMUST00000207675 1335 ntTSL 5 BASIC14.56□□□□□ -0.08
ShbQ6PD21 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ShbQ6PD21 F3-201ENSMUST00000029771 1872 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ShbQ6PD21 Gm44981-201ENSMUST00000205549 1943 ntBASIC14.56□□□□□ -0.08
ShbQ6PD21 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
ShbQ6PD21 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
ShbQ6PD21 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ShbQ6PD21 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
ShbQ6PD21 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ShbQ6PD21 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ShbQ6PD21 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
ShbQ6PD21 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
ShbQ6PD21 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
ShbQ6PD21 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
ShbQ6PD21 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms