Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Scn9aQ62205 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Scn9aQ62205 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Scn9aQ62205 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Scn9aQ62205 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Scn9aQ62205 Abhd13-201ENSMUST00000048216 5074 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Scn9aQ62205 Gm23200-201ENSMUST00000104379 132 ntBASIC15.8■□□□□ 0.12
Scn9aQ62205 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Scn9aQ62205 Mogat1-202ENSMUST00000113524 1228 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Scn9aQ62205 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Scn9aQ62205 Cabp2-201ENSMUST00000159148 1030 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Scn9aQ62205 Hsd3b6-202ENSMUST00000170847 1539 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Scn9aQ62205 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC15.8■□□□□ 0.12
Scn9aQ62205 Gm12500-202ENSMUST00000186471 2428 ntBASIC15.8■□□□□ 0.12
Scn9aQ62205 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Scn9aQ62205 6330537M06Rik-201ENSMUST00000212384 1642 ntBASIC15.8■□□□□ 0.12
Scn9aQ62205 4930578M07Rik-202ENSMUST00000212946 552 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Scn9aQ62205 Gm32468-201ENSMUST00000214199 1040 ntTSL 5 BASIC15.8■□□□□ 0.12
Scn9aQ62205 Gm32025-201ENSMUST00000217960 307 ntBASIC15.8■□□□□ 0.12
Scn9aQ62205 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC15.8■□□□□ 0.12
Scn9aQ62205 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC15.8■□□□□ 0.12
Scn9aQ62205 Pcgf5-203ENSMUST00000224679 1269 ntAPPRIS P5 BASIC15.8■□□□□ 0.12
Scn9aQ62205 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Scn9aQ62205 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC15.8■□□□□ 0.12
Scn9aQ62205 Baz1a-201ENSMUST00000038926 6188 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Scn9aQ62205 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Scn9aQ62205 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Scn9aQ62205 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Scn9aQ62205 H2-Q1-201ENSMUST00000073208 2024 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Scn9aQ62205 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Scn9aQ62205 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Scn9aQ62205 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Scn9aQ62205 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Scn9aQ62205 Gm5846-201ENSMUST00000193146 1414 ntBASIC15.8■□□□□ 0.12
Scn9aQ62205 Rbm15b-201ENSMUST00000055843 6511 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Scn9aQ62205 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC15.8■□□□□ 0.12
Scn9aQ62205 Gm4760-201ENSMUST00000119663 1030 ntBASIC15.8■□□□□ 0.12
Scn9aQ62205 Tnnt1-213ENSMUST00000178163 934 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
Scn9aQ62205 Gm8546-201ENSMUST00000178288 1264 ntBASIC15.8■□□□□ 0.12
Scn9aQ62205 Gm5523-201ENSMUST00000180415 997 ntBASIC15.8■□□□□ 0.12
Scn9aQ62205 Gm26956-201ENSMUST00000182176 986 ntBASIC15.8■□□□□ 0.12
Scn9aQ62205 Gm9678-201ENSMUST00000198979 1149 ntBASIC15.8■□□□□ 0.12
Scn9aQ62205 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Scn9aQ62205 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Scn9aQ62205 Asb8-201ENSMUST00000059112 1049 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Scn9aQ62205 Sertad1-201ENSMUST00000008528 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Scn9aQ62205 Tnrc18-201ENSMUST00000151477 6487 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Scn9aQ62205 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Scn9aQ62205 Gm44089-201ENSMUST00000203624 1930 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Scn9aQ62205 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Scn9aQ62205 Gm15897-201ENSMUST00000117770 1486 ntBASIC15.79■□□□□ 0.12
Scn9aQ62205 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
Scn9aQ62205 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Scn9aQ62205 4933431M02Rik-201ENSMUST00000203905 1432 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Scn9aQ62205 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Scn9aQ62205 Yipf1-201ENSMUST00000075693 1321 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Scn9aQ62205 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Scn9aQ62205 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Scn9aQ62205 Iqcf6-201ENSMUST00000171091 537 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Scn9aQ62205 Eloc-207ENSMUST00000187910 620 ntTSL 2 BASIC15.79■□□□□ 0.12
Scn9aQ62205 Gm9004-201ENSMUST00000218739 1222 ntBASIC15.79■□□□□ 0.12
Scn9aQ62205 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Scn9aQ62205 Crocc-201ENSMUST00000040222 6248 ntTSL 5 BASIC15.79■□□□□ 0.12
Scn9aQ62205 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Scn9aQ62205 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Scn9aQ62205 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Scn9aQ62205 Hoxd10-201ENSMUST00000061745 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Scn9aQ62205 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Scn9aQ62205 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Scn9aQ62205 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Scn9aQ62205 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Scn9aQ62205 Gm26770-201ENSMUST00000180586 2237 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Scn9aQ62205 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Scn9aQ62205 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Scn9aQ62205 Gm8994-202ENSMUST00000204530 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Scn9aQ62205 Ccdc88a-201ENSMUST00000040182 9376 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Scn9aQ62205 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Scn9aQ62205 Camk2d-228ENSMUST00000200171 5396 ntTSL 5 BASIC15.79■□□□□ 0.12
Scn9aQ62205 Hnrnpd-211ENSMUST00000172361 6811 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
Scn9aQ62205 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Scn9aQ62205 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC15.79■□□□□ 0.12
Scn9aQ62205 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Scn9aQ62205 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Scn9aQ62205 Gm9083-201ENSMUST00000120423 819 ntBASIC15.78■□□□□ 0.12
Scn9aQ62205 Rpsa-ps12-201ENSMUST00000120596 892 ntBASIC15.78■□□□□ 0.12
Scn9aQ62205 Rbm3-ps-201ENSMUST00000121422 465 ntBASIC15.78■□□□□ 0.12
Scn9aQ62205 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC15.78■□□□□ 0.12
Scn9aQ62205 AC153974.2-201ENSMUST00000218577 1025 ntBASIC15.78■□□□□ 0.12
Scn9aQ62205 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC15.78■□□□□ 0.12
Scn9aQ62205 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC15.78■□□□□ 0.12
Scn9aQ62205 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Scn9aQ62205 Cct3-ps1-201ENSMUST00000118023 1647 ntBASIC15.78■□□□□ 0.12
Scn9aQ62205 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
Scn9aQ62205 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
Scn9aQ62205 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Scn9aQ62205 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Scn9aQ62205 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Scn9aQ62205 Rlbp1-201ENSMUST00000053718 2134 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Scn9aQ62205 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Scn9aQ62205 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms