Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC13.81□□□□□ -0.2
Six4Q61321 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC13.81□□□□□ -0.2
Six4Q61321 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Six4Q61321 Thumpd1-201ENSMUST00000033236 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Six4Q61321 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Six4Q61321 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Six4Q61321 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Six4Q61321 Ttll9-202ENSMUST00000103155 1552 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Six4Q61321 Gm12341-201ENSMUST00000119724 503 ntBASIC13.81□□□□□ -0.2
Six4Q61321 A530058N18Rik-202ENSMUST00000134129 411 ntTSL 3 BASIC13.81□□□□□ -0.2
Six4Q61321 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC13.81□□□□□ -0.2
Six4Q61321 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Six4Q61321 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Six4Q61321 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Six4Q61321 Fbxw4-204ENSMUST00000160018 931 ntTSL 3 BASIC13.81□□□□□ -0.2
Six4Q61321 Dhrs2-202ENSMUST00000165432 849 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Six4Q61321 Gtpbp10-211ENSMUST00000198799 648 ntBASIC13.81□□□□□ -0.2
Six4Q61321 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC13.81□□□□□ -0.2
Six4Q61321 Gm18624-201ENSMUST00000220966 658 ntBASIC13.81□□□□□ -0.2
Six4Q61321 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC13.81□□□□□ -0.2
Six4Q61321 Taldo1-201ENSMUST00000026576 1229 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Six4Q61321 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC13.81□□□□□ -0.2
Six4Q61321 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Six4Q61321 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Six4Q61321 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Six4Q61321 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Six4Q61321 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Six4Q61321 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Six4Q61321 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Six4Q61321 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Six4Q61321 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Six4Q61321 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Six4Q61321 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Six4Q61321 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Six4Q61321 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Six4Q61321 Gm21038-201ENSMUST00000222205 1383 ntBASIC13.81□□□□□ -0.2
Six4Q61321 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Six4Q61321 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Six4Q61321 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC13.81□□□□□ -0.2
Six4Q61321 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Six4Q61321 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC13.81□□□□□ -0.2
Six4Q61321 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Six4Q61321 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
Six4Q61321 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC13.8□□□□□ -0.2
Six4Q61321 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Six4Q61321 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Six4Q61321 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC13.8□□□□□ -0.2
Six4Q61321 4933434M16Rik-202ENSMUST00000153429 1940 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Six4Q61321 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Six4Q61321 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Six4Q61321 Shroom3-202ENSMUST00000113054 6401 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Six4Q61321 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Six4Q61321 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Six4Q61321 Sirt3-210ENSMUST00000211179 1606 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Six4Q61321 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Six4Q61321 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Six4Q61321 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Six4Q61321 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Six4Q61321 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Six4Q61321 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Six4Q61321 Gm37917-201ENSMUST00000194711 392 ntBASIC13.8□□□□□ -0.2
Six4Q61321 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC13.8□□□□□ -0.2
Six4Q61321 Gm34866-201ENSMUST00000196146 515 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Six4Q61321 AC155258.1-201ENSMUST00000219303 253 ntBASIC13.8□□□□□ -0.2
Six4Q61321 AC238811.3-201ENSMUST00000225422 709 ntBASIC13.8□□□□□ -0.2
Six4Q61321 Gm4559-201ENSMUST00000080669 600 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Six4Q61321 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Six4Q61321 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Six4Q61321 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC13.8□□□□□ -0.2
Six4Q61321 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Six4Q61321 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Six4Q61321 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Six4Q61321 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Six4Q61321 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Six4Q61321 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Six4Q61321 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Six4Q61321 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Six4Q61321 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Six4Q61321 AC139350.1-201ENSMUST00000227064 1594 ntBASIC13.79□□□□□ -0.2
Six4Q61321 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Six4Q61321 Cln3-203ENSMUST00000098036 1571 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Six4Q61321 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Six4Q61321 Pcdha1-201ENSMUST00000070797 5248 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Six4Q61321 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC13.79□□□□□ -0.2
Six4Q61321 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Six4Q61321 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Six4Q61321 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Six4Q61321 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Six4Q61321 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC13.79□□□□□ -0.2
Six4Q61321 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC13.79□□□□□ -0.2
Six4Q61321 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC13.79□□□□□ -0.2
Six4Q61321 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Six4Q61321 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Six4Q61321 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC13.79□□□□□ -0.2
Six4Q61321 Gm19220-201ENSMUST00000222682 803 ntBASIC13.79□□□□□ -0.2
Six4Q61321 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Six4Q61321 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Six4Q61321 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Six4Q61321 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Six4Q61321 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 99.2 ms