Protein–RNA interactions for Protein: Q5R1C3

Trav3-3, T cell receptor alpha variable 3-3 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-3Q5R1C3 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.76
Trav3-3Q5R1C3 Tfdp2-205ENSMUST00000179416 2408 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.76
Trav3-3Q5R1C3 Gm45630-201ENSMUST00000210243 1911 ntBASIC10.27□□□□□ -0.76
Trav3-3Q5R1C3 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Trav3-3Q5R1C3 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Trav3-3Q5R1C3 Gm9544-201ENSMUST00000223349 2482 ntBASIC10.27□□□□□ -0.77
Trav3-3Q5R1C3 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav3-3Q5R1C3 Anxa2-201ENSMUST00000034756 1447 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav3-3Q5R1C3 Tmc4-201ENSMUST00000038743 2310 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav3-3Q5R1C3 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav3-3Q5R1C3 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Trav3-3Q5R1C3 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav3-3Q5R1C3 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC10.27□□□□□ -0.77
Trav3-3Q5R1C3 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav3-3Q5R1C3 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav3-3Q5R1C3 Specc1-213ENSMUST00000202179 6676 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav3-3Q5R1C3 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Trav3-3Q5R1C3 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav3-3Q5R1C3 Cfap69-205ENSMUST00000135252 2188 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav3-3Q5R1C3 Mroh1-204ENSMUST00000159218 5085 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Trav3-3Q5R1C3 Trim46-202ENSMUST00000090924 2721 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trav3-3Q5R1C3 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC10.27□□□□□ -0.77
Trav3-3Q5R1C3 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC10.27□□□□□ -0.77
Trav3-3Q5R1C3 Gm43767-201ENSMUST00000198933 381 ntBASIC10.27□□□□□ -0.77
Trav3-3Q5R1C3 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC10.27□□□□□ -0.77
Trav3-3Q5R1C3 Gm18669-201ENSMUST00000216049 778 ntBASIC10.27□□□□□ -0.77
Trav3-3Q5R1C3 Ifi27-204ENSMUST00000079294 963 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav3-3Q5R1C3 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav3-3Q5R1C3 Gm10190-201ENSMUST00000086549 324 ntAPPRIS P1 BASIC10.27□□□□□ -0.77
Trav3-3Q5R1C3 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Trav3-3Q5R1C3 Gm38385-201ENSMUST00000194454 2351 ntBASIC10.27□□□□□ -0.77
Trav3-3Q5R1C3 Mark4-201ENSMUST00000085715 3886 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav3-3Q5R1C3 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Trav3-3Q5R1C3 Hnrnpk-202ENSMUST00000116403 2970 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trav3-3Q5R1C3 Zufsp-201ENSMUST00000048222 2991 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trav3-3Q5R1C3 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav3-3Q5R1C3 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav3-3Q5R1C3 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav3-3Q5R1C3 Gm6157-201ENSMUST00000199935 1897 ntBASIC10.27□□□□□ -0.77
Trav3-3Q5R1C3 9130401M01Rik-201ENSMUST00000100655 1341 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav3-3Q5R1C3 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Trav3-3Q5R1C3 Lmbr1-201ENSMUST00000055195 4926 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav3-3Q5R1C3 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav3-3Q5R1C3 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav3-3Q5R1C3 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav3-3Q5R1C3 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav3-3Q5R1C3 Tmem266-202ENSMUST00000085754 4417 ntAPPRIS ALT2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Trav3-3Q5R1C3 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Trav3-3Q5R1C3 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Trav3-3Q5R1C3 D10Jhu81e-201ENSMUST00000001242 1378 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav3-3Q5R1C3 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC10.26□□□□□ -0.77
Trav3-3Q5R1C3 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trav3-3Q5R1C3 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trav3-3Q5R1C3 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC10.26□□□□□ -0.77
Trav3-3Q5R1C3 Gm45650-201ENSMUST00000211162 2169 ntTSL 5 BASIC10.26□□□□□ -0.77
Trav3-3Q5R1C3 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav3-3Q5R1C3 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav3-3Q5R1C3 Syncrip-210ENSMUST00000174391 6257 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trav3-3Q5R1C3 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav3-3Q5R1C3 Ambra1-204ENSMUST00000111316 5063 ntTSL 5 BASIC10.26□□□□□ -0.77
Trav3-3Q5R1C3 Man1a2-201ENSMUST00000008907 7969 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav3-3Q5R1C3 Capn8-202ENSMUST00000168514 2483 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trav3-3Q5R1C3 1700001L05Rik-201ENSMUST00000100370 2270 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trav3-3Q5R1C3 Cyth3-201ENSMUST00000110727 2068 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trav3-3Q5R1C3 AC122840.1-201ENSMUST00000220915 3334 ntBASIC10.26□□□□□ -0.77
Trav3-3Q5R1C3 Tpm1-214ENSMUST00000113701 1677 ntTSL 5 BASIC10.26□□□□□ -0.77
Trav3-3Q5R1C3 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav3-3Q5R1C3 Sidt1-205ENSMUST00000136381 4404 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav3-3Q5R1C3 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trav3-3Q5R1C3 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav3-3Q5R1C3 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav3-3Q5R1C3 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav3-3Q5R1C3 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav3-3Q5R1C3 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC10.26□□□□□ -0.77
Trav3-3Q5R1C3 U2af1-201ENSMUST00000014684 907 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav3-3Q5R1C3 U2af1-202ENSMUST00000166526 907 ntAPPRIS ALT2 TSL 2 BASIC10.26□□□□□ -0.77
Trav3-3Q5R1C3 Gm2308-201ENSMUST00000166539 1004 ntBASIC10.26□□□□□ -0.77
Trav3-3Q5R1C3 Gm8584-201ENSMUST00000171982 758 ntBASIC10.26□□□□□ -0.77
Trav3-3Q5R1C3 Cmtm5-203ENSMUST00000227441 610 ntBASIC10.26□□□□□ -0.77
Trav3-3Q5R1C3 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav3-3Q5R1C3 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav3-3Q5R1C3 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav3-3Q5R1C3 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav3-3Q5R1C3 AC166574.4-201ENSMUST00000227165 1937 ntBASIC10.26□□□□□ -0.77
Trav3-3Q5R1C3 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav3-3Q5R1C3 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav3-3Q5R1C3 Tmem215-201ENSMUST00000049655 4733 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav3-3Q5R1C3 Abca7-202ENSMUST00000132517 6696 ntAPPRIS P3 TSL 5 BASIC10.26□□□□□ -0.77
Trav3-3Q5R1C3 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav3-3Q5R1C3 9330182L06Rik-204ENSMUST00000134991 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav3-3Q5R1C3 Fam177a-201ENSMUST00000177768 3922 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav3-3Q5R1C3 Hlcs-201ENSMUST00000099512 4833 ntAPPRIS P2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav3-3Q5R1C3 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC10.26□□□□□ -0.77
Trav3-3Q5R1C3 Pias3-202ENSMUST00000107076 2858 ntTSL 1 (best) BASIC10.26□□□□□ -0.77
Trav3-3Q5R1C3 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav3-3Q5R1C3 Amotl2-211ENSMUST00000153965 4222 ntAPPRIS ALT2 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav3-3Q5R1C3 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav3-3Q5R1C3 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC10.26□□□□□ -0.77
Trav3-3Q5R1C3 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC10.26□□□□□ -0.77
Trav3-3Q5R1C3 Gm7104-201ENSMUST00000179741 2532 ntBASIC10.26□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 24.1 ms