Protein–RNA interactions for Protein: Q3UHA3

Spg11, Spatacsin, mousemouse

Predictions only

Length 2,430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Spg11Q3UHA3 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC12.49□□□□□ -0.41
Spg11Q3UHA3 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC12.49□□□□□ -0.41
Spg11Q3UHA3 Gm31401-201ENSMUST00000207352 734 ntTSL 3 BASIC12.49□□□□□ -0.41
Spg11Q3UHA3 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Spg11Q3UHA3 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Spg11Q3UHA3 AC174678.1-201ENSMUST00000228007 2749 ntBASIC12.49□□□□□ -0.41
Spg11Q3UHA3 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Spg11Q3UHA3 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Spg11Q3UHA3 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Spg11Q3UHA3 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Spg11Q3UHA3 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Spg11Q3UHA3 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Spg11Q3UHA3 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Spg11Q3UHA3 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Spg11Q3UHA3 Kcns2-201ENSMUST00000072868 5456 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Spg11Q3UHA3 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Spg11Q3UHA3 Gm38391-201ENSMUST00000191720 4069 ntBASIC12.49□□□□□ -0.41
Spg11Q3UHA3 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Spg11Q3UHA3 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Spg11Q3UHA3 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Spg11Q3UHA3 1700020A23Rik-203ENSMUST00000189961 541 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Spg11Q3UHA3 Gm33222-201ENSMUST00000193725 654 ntTSL 3 BASIC12.49□□□□□ -0.41
Spg11Q3UHA3 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Spg11Q3UHA3 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Spg11Q3UHA3 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
Spg11Q3UHA3 Cstf3-201ENSMUST00000028599 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Spg11Q3UHA3 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Spg11Q3UHA3 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Spg11Q3UHA3 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
Spg11Q3UHA3 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Spg11Q3UHA3 Pltp-203ENSMUST00000109317 1575 ntTSL 5 BASIC12.48□□□□□ -0.41
Spg11Q3UHA3 Wnt8b-201ENSMUST00000041163 3376 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Spg11Q3UHA3 Krt31-201ENSMUST00000007318 1581 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Spg11Q3UHA3 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Spg11Q3UHA3 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
Spg11Q3UHA3 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Spg11Q3UHA3 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Spg11Q3UHA3 Rbm18-202ENSMUST00000122456 781 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Spg11Q3UHA3 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC12.48□□□□□ -0.41
Spg11Q3UHA3 Aamdc-213ENSMUST00000154853 883 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Spg11Q3UHA3 Gm27046-201ENSMUST00000182160 463 ntBASIC12.48□□□□□ -0.41
Spg11Q3UHA3 4930405N21Rik-201ENSMUST00000199950 1200 ntBASIC12.48□□□□□ -0.41
Spg11Q3UHA3 Gm43916-201ENSMUST00000205062 967 ntBASIC12.48□□□□□ -0.41
Spg11Q3UHA3 Gm19640-201ENSMUST00000214849 464 ntBASIC12.48□□□□□ -0.41
Spg11Q3UHA3 AC163667.3-201ENSMUST00000225774 222 ntBASIC12.48□□□□□ -0.41
Spg11Q3UHA3 1700012P22Rik-201ENSMUST00000030323 974 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Spg11Q3UHA3 AC121801.1-201ENSMUST00000225363 1899 ntBASIC12.48□□□□□ -0.41
Spg11Q3UHA3 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Spg11Q3UHA3 Rhot1-203ENSMUST00000077451 3297 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Spg11Q3UHA3 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Spg11Q3UHA3 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC12.48□□□□□ -0.41
Spg11Q3UHA3 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Spg11Q3UHA3 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Spg11Q3UHA3 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Spg11Q3UHA3 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
Spg11Q3UHA3 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Spg11Q3UHA3 Uts2r-201ENSMUST00000039044 1703 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
Spg11Q3UHA3 Gm42632-201ENSMUST00000201707 2411 ntBASIC12.48□□□□□ -0.41
Spg11Q3UHA3 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC12.48□□□□□ -0.41
Spg11Q3UHA3 Crtc3-201ENSMUST00000122255 5115 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Spg11Q3UHA3 BC016548-202ENSMUST00000153797 805 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Spg11Q3UHA3 Gm38304-201ENSMUST00000161826 600 ntTSL 3 BASIC12.48□□□□□ -0.41
Spg11Q3UHA3 Gm28324-201ENSMUST00000187913 264 ntBASIC12.48□□□□□ -0.41
Spg11Q3UHA3 AC156501.1-201ENSMUST00000228219 270 ntBASIC12.48□□□□□ -0.41
Spg11Q3UHA3 Pxt1-201ENSMUST00000051526 710 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Spg11Q3UHA3 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Spg11Q3UHA3 Fam219b-201ENSMUST00000093833 3001 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Spg11Q3UHA3 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Spg11Q3UHA3 Islr2-203ENSMUST00000163897 4303 ntAPPRIS P3 TSL 2 BASIC12.48□□□□□ -0.41
Spg11Q3UHA3 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Spg11Q3UHA3 H2-T22-201ENSMUST00000058801 1534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Spg11Q3UHA3 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
Spg11Q3UHA3 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Spg11Q3UHA3 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Spg11Q3UHA3 Gm14780-201ENSMUST00000118387 2737 ntBASIC12.47□□□□□ -0.41
Spg11Q3UHA3 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Spg11Q3UHA3 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Spg11Q3UHA3 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC12.47□□□□□ -0.41
Spg11Q3UHA3 Mief1-203ENSMUST00000228788 5352 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Spg11Q3UHA3 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Spg11Q3UHA3 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Spg11Q3UHA3 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC12.47□□□□□ -0.41
Spg11Q3UHA3 Gm11801-201ENSMUST00000117807 746 ntBASIC12.47□□□□□ -0.41
Spg11Q3UHA3 Sec11a-204ENSMUST00000120285 875 ntTSL 3 BASIC12.47□□□□□ -0.41
Spg11Q3UHA3 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Spg11Q3UHA3 9030616G12Rik-201ENSMUST00000181142 644 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Spg11Q3UHA3 Gm5369-201ENSMUST00000217499 588 ntBASIC12.47□□□□□ -0.41
Spg11Q3UHA3 Mrpl30-201ENSMUST00000027256 969 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Spg11Q3UHA3 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Spg11Q3UHA3 Gm9873-201ENSMUST00000063891 1097 ntBASIC12.47□□□□□ -0.41
Spg11Q3UHA3 Apc-201ENSMUST00000066133 1185 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Spg11Q3UHA3 Gm14150-201ENSMUST00000122404 1354 ntBASIC12.47□□□□□ -0.41
Spg11Q3UHA3 Gm9109-201ENSMUST00000120254 1405 ntBASIC12.47□□□□□ -0.41
Spg11Q3UHA3 Srsf5-202ENSMUST00000110351 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Spg11Q3UHA3 Gm42918-201ENSMUST00000199249 1580 ntBASIC12.47□□□□□ -0.41
Spg11Q3UHA3 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Spg11Q3UHA3 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Spg11Q3UHA3 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Spg11Q3UHA3 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Spg11Q3UHA3 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms