Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC17.8■□□□□ 0.44
CTC1Q2NKJ3 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTC1Q2NKJ3 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC17.8■□□□□ 0.44
CTC1Q2NKJ3 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CTC1Q2NKJ3 GALNT11-205ENST00000430044 2727 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
CTC1Q2NKJ3 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC17.8■□□□□ 0.44
CTC1Q2NKJ3 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CTC1Q2NKJ3 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTC1Q2NKJ3 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTC1Q2NKJ3 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTC1Q2NKJ3 TGDS-201ENST00000261296 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTC1Q2NKJ3 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTC1Q2NKJ3 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTC1Q2NKJ3 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTC1Q2NKJ3 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CTC1Q2NKJ3 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTC1Q2NKJ3 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.8■□□□□ 0.44
CTC1Q2NKJ3 CTD-2194D22.4-201ENST00000514569 1635 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
CTC1Q2NKJ3 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
CTC1Q2NKJ3 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
CTC1Q2NKJ3 HNF1A-216ENST00000617366 2473 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CTC1Q2NKJ3 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
CTC1Q2NKJ3 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CTC1Q2NKJ3 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CTC1Q2NKJ3 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CTC1Q2NKJ3 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CTC1Q2NKJ3 OLIG2-201ENST00000333337 3262 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
CTC1Q2NKJ3 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.79■□□□□ 0.44
CTC1Q2NKJ3 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CTC1Q2NKJ3 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CTC1Q2NKJ3 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
CTC1Q2NKJ3 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC17.79■□□□□ 0.44
CTC1Q2NKJ3 LY6E-204ENST00000519546 971 ntTSL 2 BASIC17.79■□□□□ 0.44
CTC1Q2NKJ3 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC17.79■□□□□ 0.44
CTC1Q2NKJ3 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
CTC1Q2NKJ3 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC17.79■□□□□ 0.44
CTC1Q2NKJ3 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC17.79■□□□□ 0.44
CTC1Q2NKJ3 AC104581.1-203ENST00000640240 353 ntTSL 2 BASIC17.79■□□□□ 0.44
CTC1Q2NKJ3 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CTC1Q2NKJ3 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
CTC1Q2NKJ3 PSMD6-210ENST00000492933 1495 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CTC1Q2NKJ3 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
CTC1Q2NKJ3 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
CTC1Q2NKJ3 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.79■□□□□ 0.44
CTC1Q2NKJ3 AL355312.1-201ENST00000407115 2176 ntBASIC17.79■□□□□ 0.44
CTC1Q2NKJ3 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CTC1Q2NKJ3 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CTC1Q2NKJ3 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC17.78■□□□□ 0.44
CTC1Q2NKJ3 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.78■□□□□ 0.44
CTC1Q2NKJ3 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
CTC1Q2NKJ3 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CTC1Q2NKJ3 AIDA-201ENST00000340020 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CTC1Q2NKJ3 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CTC1Q2NKJ3 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CTC1Q2NKJ3 CTNNB1-210ENST00000453024 2841 ntTSL 2 BASIC17.78■□□□□ 0.44
CTC1Q2NKJ3 KLC1-207ENST00000445352 2416 ntTSL 5 BASIC17.78■□□□□ 0.44
CTC1Q2NKJ3 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CTC1Q2NKJ3 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.78■□□□□ 0.44
CTC1Q2NKJ3 AC011270.2-201ENST00000624293 2550 ntBASIC17.78■□□□□ 0.44
CTC1Q2NKJ3 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CTC1Q2NKJ3 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC17.78■□□□□ 0.44
CTC1Q2NKJ3 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC17.78■□□□□ 0.44
CTC1Q2NKJ3 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC17.78■□□□□ 0.44
CTC1Q2NKJ3 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CTC1Q2NKJ3 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CTC1Q2NKJ3 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC17.78■□□□□ 0.44
CTC1Q2NKJ3 TP53TG3HP-202ENST00000569755 579 ntBASIC17.78■□□□□ 0.44
CTC1Q2NKJ3 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
CTC1Q2NKJ3 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC17.78■□□□□ 0.44
CTC1Q2NKJ3 AL139327.4-201ENST00000612362 153 ntBASIC17.78■□□□□ 0.44
CTC1Q2NKJ3 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
CTC1Q2NKJ3 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
CTC1Q2NKJ3 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.78■□□□□ 0.44
CTC1Q2NKJ3 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CTC1Q2NKJ3 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC17.78■□□□□ 0.44
CTC1Q2NKJ3 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CTC1Q2NKJ3 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
CTC1Q2NKJ3 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CTC1Q2NKJ3 REXO1L11P-201ENST00000620964 1927 ntBASIC17.78■□□□□ 0.44
CTC1Q2NKJ3 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CTC1Q2NKJ3 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
CTC1Q2NKJ3 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.78■□□□□ 0.44
CTC1Q2NKJ3 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.78■□□□□ 0.44
CTC1Q2NKJ3 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
CTC1Q2NKJ3 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
CTC1Q2NKJ3 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CTC1Q2NKJ3 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CTC1Q2NKJ3 SCP2-202ENST00000371513 2003 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CTC1Q2NKJ3 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC17.77■□□□□ 0.44
CTC1Q2NKJ3 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CTC1Q2NKJ3 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CTC1Q2NKJ3 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CTC1Q2NKJ3 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
CTC1Q2NKJ3 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17.77■□□□□ 0.44
CTC1Q2NKJ3 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.77■□□□□ 0.44
CTC1Q2NKJ3 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
CTC1Q2NKJ3 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
CTC1Q2NKJ3 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC17.77■□□□□ 0.44
CTC1Q2NKJ3 REEP4-207ENST00000523293 913 ntTSL 3 BASIC17.77■□□□□ 0.44
CTC1Q2NKJ3 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC17.77■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms