Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Ppp2r2c-201ENSMUST00000031003 4088 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox9Q04887 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Sox9Q04887 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Sox9Q04887 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox9Q04887 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox9Q04887 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox9Q04887 Rab23-201ENSMUST00000088287 4322 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox9Q04887 Lurap1l-201ENSMUST00000055922 3066 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Sox9Q04887 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Sox9Q04887 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Sox9Q04887 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Sox9Q04887 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sox9Q04887 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sox9Q04887 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sox9Q04887 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Sox9Q04887 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC14.08□□□□□ -0.16
Sox9Q04887 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Sox9Q04887 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Sox9Q04887 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sox9Q04887 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sox9Q04887 Ighv2-9-201ENSMUST00000103451 362 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
Sox9Q04887 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
Sox9Q04887 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Sox9Q04887 Gm11618-201ENSMUST00000117946 267 ntBASIC14.08□□□□□ -0.16
Sox9Q04887 Gm11222-201ENSMUST00000119005 738 ntBASIC14.08□□□□□ -0.16
Sox9Q04887 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC14.08□□□□□ -0.16
Sox9Q04887 Gm11964-201ENSMUST00000120982 444 ntBASIC14.08□□□□□ -0.16
Sox9Q04887 Tnfrsf18-203ENSMUST00000122001 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sox9Q04887 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
Sox9Q04887 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Sox9Q04887 Gm5523-201ENSMUST00000180415 997 ntBASIC14.08□□□□□ -0.16
Sox9Q04887 Gm2260-201ENSMUST00000184965 657 ntBASIC14.08□□□□□ -0.16
Sox9Q04887 Gm2453-202ENSMUST00000195508 568 ntTSL 3 BASIC14.08□□□□□ -0.16
Sox9Q04887 Gm45186-201ENSMUST00000206874 478 ntBASIC14.08□□□□□ -0.16
Sox9Q04887 Gm18212-201ENSMUST00000211678 889 ntBASIC14.08□□□□□ -0.16
Sox9Q04887 CT025533.2-201ENSMUST00000228715 1248 ntBASIC14.08□□□□□ -0.16
Sox9Q04887 3300002I08Rik-201ENSMUST00000051153 650 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sox9Q04887 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sox9Q04887 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Sox9Q04887 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sox9Q04887 Rn7sk-201ENSMUST00000083103 331 ntBASIC14.08□□□□□ -0.16
Sox9Q04887 Gm26315-201ENSMUST00000083890 321 ntBASIC14.08□□□□□ -0.16
Sox9Q04887 Zfp932-201ENSMUST00000099484 451 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Sox9Q04887 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sox9Q04887 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sox9Q04887 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sox9Q04887 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sox9Q04887 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sox9Q04887 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sox9Q04887 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Sox9Q04887 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sox9Q04887 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Sox9Q04887 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox9Q04887 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox9Q04887 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox9Q04887 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Sox9Q04887 App-204ENSMUST00000227021 3264 ntAPPRIS ALT2 BASIC14.07□□□□□ -0.16
Sox9Q04887 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.07□□□□□ -0.16
Sox9Q04887 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox9Q04887 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox9Q04887 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox9Q04887 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Sox9Q04887 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox9Q04887 Gm15544-201ENSMUST00000118776 1531 ntBASIC14.07□□□□□ -0.16
Sox9Q04887 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Sox9Q04887 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Sox9Q04887 Gm24830-201ENSMUST00000102024 166 ntBASIC14.07□□□□□ -0.16
Sox9Q04887 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
Sox9Q04887 Gm14230-202ENSMUST00000137463 874 ntTSL 2 BASIC14.07□□□□□ -0.16
Sox9Q04887 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Sox9Q04887 Gm25890-201ENSMUST00000177643 165 ntBASIC14.07□□□□□ -0.16
Sox9Q04887 Rnu1b2-201ENSMUST00000178073 165 ntBASIC14.07□□□□□ -0.16
Sox9Q04887 Rnu1b1-201ENSMUST00000178250 165 ntBASIC14.07□□□□□ -0.16
Sox9Q04887 Gm22614-201ENSMUST00000178300 165 ntBASIC14.07□□□□□ -0.16
Sox9Q04887 Gm42797-201ENSMUST00000197573 494 ntTSL 3 BASIC14.07□□□□□ -0.16
Sox9Q04887 AC148335.1-201ENSMUST00000218778 818 ntTSL 5 BASIC14.07□□□□□ -0.16
Sox9Q04887 Gm22042-201ENSMUST00000082989 165 ntBASIC14.07□□□□□ -0.16
Sox9Q04887 Gm26232-201ENSMUST00000083360 166 ntBASIC14.07□□□□□ -0.16
Sox9Q04887 Gm24136-201ENSMUST00000083374 165 ntBASIC14.07□□□□□ -0.16
Sox9Q04887 Rnu1b6-201ENSMUST00000083839 166 ntBASIC14.07□□□□□ -0.16
Sox9Q04887 Gm26110-201ENSMUST00000083971 165 ntBASIC14.07□□□□□ -0.16
Sox9Q04887 Gm45684-201ENSMUST00000210244 1571 ntBASIC14.07□□□□□ -0.16
Sox9Q04887 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox9Q04887 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox9Q04887 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Sox9Q04887 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC14.07□□□□□ -0.16
Sox9Q04887 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Sox9Q04887 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC14.07□□□□□ -0.16
Sox9Q04887 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
Sox9Q04887 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Sox9Q04887 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.07□□□□□ -0.16
Sox9Q04887 Ccnj-202ENSMUST00000119316 3763 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Sox9Q04887 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Sox9Q04887 Gm9755-201ENSMUST00000032981 1356 ntBASIC14.07□□□□□ -0.16
Sox9Q04887 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC14.07□□□□□ -0.16
Sox9Q04887 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC14.07□□□□□ -0.16
Sox9Q04887 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
Sox9Q04887 Oas1f-201ENSMUST00000057814 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sox9Q04887 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Sox9Q04887 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 38.7 ms