Protein–RNA interactions for Protein: P97952

Scn1b, Sodium channel subunit beta-1, mousemouse

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn1bP97952 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scn1bP97952 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scn1bP97952 Kcnt1-201ENSMUST00000037580 5881 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scn1bP97952 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scn1bP97952 Gm29052-201ENSMUST00000187700 1451 ntTSL 5 BASIC12.51□□□□□ -0.41
Scn1bP97952 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Scn1bP97952 Cd34-201ENSMUST00000016638 2454 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scn1bP97952 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC12.51□□□□□ -0.41
Scn1bP97952 Gm8096-201ENSMUST00000209921 1591 ntBASIC12.51□□□□□ -0.41
Scn1bP97952 Capn3-203ENSMUST00000090028 2640 ntTSL 5 BASIC12.51□□□□□ -0.41
Scn1bP97952 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scn1bP97952 Hnrnpk-232ENSMUST00000225674 2704 ntBASIC12.51□□□□□ -0.41
Scn1bP97952 Pdlim5-208ENSMUST00000196220 1725 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Scn1bP97952 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Scn1bP97952 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Scn1bP97952 AC115735.4-201ENSMUST00000227460 1944 ntBASIC12.5□□□□□ -0.41
Scn1bP97952 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scn1bP97952 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scn1bP97952 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Scn1bP97952 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scn1bP97952 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scn1bP97952 Cpeb1-201ENSMUST00000098331 3111 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scn1bP97952 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scn1bP97952 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Scn1bP97952 Lamc3-201ENSMUST00000028187 5871 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scn1bP97952 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Scn1bP97952 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC12.5□□□□□ -0.41
Scn1bP97952 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Scn1bP97952 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Scn1bP97952 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC12.5□□□□□ -0.41
Scn1bP97952 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC12.5□□□□□ -0.41
Scn1bP97952 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scn1bP97952 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scn1bP97952 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scn1bP97952 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scn1bP97952 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scn1bP97952 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC12.5□□□□□ -0.41
Scn1bP97952 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scn1bP97952 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scn1bP97952 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scn1bP97952 Gm10728-201ENSMUST00000194292 1829 ntBASIC12.5□□□□□ -0.41
Scn1bP97952 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scn1bP97952 Crhr2-201ENSMUST00000003568 2695 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Scn1bP97952 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.5□□□□□ -0.41
Scn1bP97952 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scn1bP97952 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Scn1bP97952 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Scn1bP97952 Tbkbp1-204ENSMUST00000107615 3333 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Scn1bP97952 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scn1bP97952 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scn1bP97952 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scn1bP97952 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Scn1bP97952 Proser3-206ENSMUST00000215288 2465 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Scn1bP97952 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Scn1bP97952 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scn1bP97952 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Scn1bP97952 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.49□□□□□ -0.41
Scn1bP97952 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scn1bP97952 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scn1bP97952 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scn1bP97952 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
Scn1bP97952 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scn1bP97952 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scn1bP97952 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scn1bP97952 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scn1bP97952 Gm9279-201ENSMUST00000223175 1606 ntBASIC12.49□□□□□ -0.41
Scn1bP97952 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scn1bP97952 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scn1bP97952 Grin1-201ENSMUST00000028335 4238 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Scn1bP97952 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scn1bP97952 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scn1bP97952 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scn1bP97952 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Scn1bP97952 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Scn1bP97952 Psma6-204ENSMUST00000163070 787 ntTSL 5 BASIC12.49□□□□□ -0.41
Scn1bP97952 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC12.49□□□□□ -0.41
Scn1bP97952 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC12.49□□□□□ -0.41
Scn1bP97952 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scn1bP97952 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scn1bP97952 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC12.49□□□□□ -0.41
Scn1bP97952 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scn1bP97952 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scn1bP97952 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scn1bP97952 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scn1bP97952 Dbn1-201ENSMUST00000021950 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scn1bP97952 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scn1bP97952 Stau1-201ENSMUST00000049412 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scn1bP97952 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scn1bP97952 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scn1bP97952 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
Scn1bP97952 Micu1-202ENSMUST00000092508 2294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scn1bP97952 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC12.49□□□□□ -0.41
Scn1bP97952 Sdf4-201ENSMUST00000050078 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
Scn1bP97952 Paupar-201ENSMUST00000194826 3482 ntBASIC12.49□□□□□ -0.41
Scn1bP97952 AC154725.1-201ENSMUST00000224826 1961 ntBASIC12.49□□□□□ -0.41
Scn1bP97952 Gm37437-201ENSMUST00000194451 1937 ntBASIC12.49□□□□□ -0.41
Scn1bP97952 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Scn1bP97952 Chpf2-201ENSMUST00000088295 5371 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Scn1bP97952 AC025913.2-201ENSMUST00000220136 1766 ntBASIC12.48□□□□□ -0.41
Scn1bP97952 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC12.48□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 37.8 ms