Protein–RNA interactions for Protein: P86448

Trim43b, Tripartite motif-containing protein 43B, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43bP86448 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim43bP86448 Scg3-201ENSMUST00000034699 2384 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim43bP86448 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim43bP86448 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC14.11□□□□□ -0.15
Trim43bP86448 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trim43bP86448 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim43bP86448 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim43bP86448 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim43bP86448 Gm9754-201ENSMUST00000031305 3004 ntTSL 2 BASIC14.11□□□□□ -0.15
Trim43bP86448 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim43bP86448 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC14.11□□□□□ -0.15
Trim43bP86448 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trim43bP86448 Gm13015-201ENSMUST00000118674 204 ntBASIC14.11□□□□□ -0.15
Trim43bP86448 Crybb3-204ENSMUST00000119627 828 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Trim43bP86448 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trim43bP86448 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC14.11□□□□□ -0.15
Trim43bP86448 Zfp511-201ENSMUST00000168194 1076 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Trim43bP86448 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Trim43bP86448 Bnc2-215ENSMUST00000176691 3385 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim43bP86448 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim43bP86448 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim43bP86448 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trim43bP86448 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim43bP86448 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
Trim43bP86448 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim43bP86448 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
Trim43bP86448 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
Trim43bP86448 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.11□□□□□ -0.15
Trim43bP86448 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC14.11□□□□□ -0.15
Trim43bP86448 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim43bP86448 Awat2-201ENSMUST00000033567 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim43bP86448 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim43bP86448 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim43bP86448 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trim43bP86448 Ddi2-202ENSMUST00000177592 3539 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trim43bP86448 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trim43bP86448 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Trim43bP86448 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC14.11□□□□□ -0.15
Trim43bP86448 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim43bP86448 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim43bP86448 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC14.1□□□□□ -0.15
Trim43bP86448 Dcaf11-204ENSMUST00000121622 2379 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Trim43bP86448 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Trim43bP86448 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trim43bP86448 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim43bP86448 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Trim43bP86448 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Trim43bP86448 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim43bP86448 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC14.1□□□□□ -0.15
Trim43bP86448 Gm27306-201ENSMUST00000183970 107 ntBASIC14.1□□□□□ -0.15
Trim43bP86448 Gm29541-201ENSMUST00000191351 678 ntBASIC14.1□□□□□ -0.15
Trim43bP86448 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim43bP86448 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim43bP86448 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Trim43bP86448 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim43bP86448 Ispd-205ENSMUST00000221895 4022 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trim43bP86448 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trim43bP86448 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim43bP86448 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC14.1□□□□□ -0.15
Trim43bP86448 Tmem51os1-203ENSMUST00000150202 1667 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trim43bP86448 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim43bP86448 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim43bP86448 Hgs-202ENSMUST00000106203 2901 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Trim43bP86448 Hgs-201ENSMUST00000026900 2908 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim43bP86448 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trim43bP86448 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim43bP86448 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC14.1□□□□□ -0.15
Trim43bP86448 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Trim43bP86448 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trim43bP86448 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Trim43bP86448 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trim43bP86448 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim43bP86448 Thap2-202ENSMUST00000218842 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim43bP86448 Gm9347-201ENSMUST00000211473 1607 ntBASIC14.09□□□□□ -0.15
Trim43bP86448 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim43bP86448 Rab3d-201ENSMUST00000115351 3835 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim43bP86448 Gm5566-201ENSMUST00000116118 459 ntBASIC14.09□□□□□ -0.15
Trim43bP86448 Gm14767-201ENSMUST00000121559 586 ntBASIC14.09□□□□□ -0.15
Trim43bP86448 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Trim43bP86448 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC14.09□□□□□ -0.15
Trim43bP86448 Gm18766-201ENSMUST00000189811 808 ntBASIC14.09□□□□□ -0.15
Trim43bP86448 Gm20949-201ENSMUST00000206478 952 ntBASIC14.09□□□□□ -0.15
Trim43bP86448 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Trim43bP86448 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trim43bP86448 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim43bP86448 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim43bP86448 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim43bP86448 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC14.09□□□□□ -0.15
Trim43bP86448 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trim43bP86448 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Trim43bP86448 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim43bP86448 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim43bP86448 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Trim43bP86448 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Trim43bP86448 Prrt3-203ENSMUST00000204268 3741 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trim43bP86448 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Trim43bP86448 Gm6756-201ENSMUST00000180647 1620 ntBASIC14.08□□□□□ -0.15
Trim43bP86448 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trim43bP86448 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Trim43bP86448 Ralgps2-214ENSMUST00000191605 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms